Gene Caci_7488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7488 
Symbol 
ID8338858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8681995 
End bp8682555 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content71% 
IMG OID644960567 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_003118154 
Protein GI256396590 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCTC GGATCCCACC GCTGTCGCCG CCCTACTCCG CCGAAGCCGC GGACCTGCTG 
GATCGCATGA TGCCCGGCGA CCAGGAACCC ATCGCCCTGT TCCGCACCTT CGCCCGCAAC
CTCCCGATGG CCGAGGCGCT GCACGTCTGG GGCAGCCACG TCCTCAGCCG CCGCCTCACT
CTCACCCTGC GCGACCGCGA AATCCTCATC GACCGCACCT GCGCGCGCTG CGGCTGCGAA
TACGAGTGGG GCGTCCACAT CGCCCACTTC GCCGACCGCG CCGCCCTGAC CGGCGACCAG
ATCACGGCAC TGACCCACGG AACCAGCGCC GACCCCTGCT GGACCACCGA CCGCGACCGC
CTGCTTCTCG ACGCGGCCGA CGCCCTGCAC GACGAGAACG ACATCGACGA CGCCCTCTGG
ACCCGCCTCG CCGCTGAGTT CACCGACGAC CAGCTCCTCG ATCTCCTGCT GGTGTGCGGC
TGGTACCACG CCATCAGCTT CACCGCCCGC GCCGCGCGCC TCCCGCTGGA GCCGGGAGCG
GCGCGCTTCG AGACAGCCTG A
 
Protein sequence
MAARIPPLSP PYSAEAADLL DRMMPGDQEP IALFRTFARN LPMAEALHVW GSHVLSRRLT 
LTLRDREILI DRTCARCGCE YEWGVHIAHF ADRAALTGDQ ITALTHGTSA DPCWTTDRDR
LLLDAADALH DENDIDDALW TRLAAEFTDD QLLDLLLVCG WYHAISFTAR AARLPLEPGA
ARFETA