Gene Caci_7482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7482 
Symbol 
ID8338852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8676552 
End bp8677802 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content67% 
IMG OID644960561 
ProductDyp-type peroxidase family 
Protein accessionYP_003118148 
Protein GI256396584 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2837] Predicted iron-dependent peroxidase 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01412] Tat-translocated enzyme
[TIGR01413] Dyp-type peroxidase family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCT CGATCGGCCG CCGATCTCTG CTCCGTGCTG CTGGTATCGG GGGTGCTGCG 
GCTGCCGCTA CTGCTGCTGG GACCGGTGTT GCGTTGACTC GCGACACCGC TTCGGCTGCT
GCTGTCTCCG ATGGTGCTGT TGTTGCGCCC GCGCCTGCGC CTTCGTTTCG TGGGCCGCAT
CAGGCTGGTG TGCTGCGGGC GGCGGCGCCG GCGACGATCA TGCTGGCGCT GGATGTCACC
GCGGCTGACA AGGCTGGGCT CGTTGAGCTC TTTCGGACGC TCACTGCTCG CGCGGCTTTT
CTCACCTCGG GTGGGCTGCC GGATCAGGTG GGGGTTGCCG GGCCGCCGAG TGATTCGGGG
ACGCTGGGGC CGGAGGTTGC TGCTGACAAT TTGACGGTGA CGCTGGGGGT TGGGTCCTCG
TTGTTCGACG GGCGGTTCGG GCTGGCTTCA CGCAAGCCGG CCGGGTTGTT TCCGATGCCG
GTGTTCCCGA ATGACGACCT TGATCAGGGG CAGTGTCATG GCGATTTGAG TCTTCAGCTC
TCGGCTGATC ACAGTGACAC CGTGTTGCAC GCTTTGCGCG ACATCATGCG CGGGGTTCGG
GGTGCGGCGC AGATTCGGTG GCGGATCGAC GGCTTCGTCA GTCCGCCGCG TCCTTGGGGG
ACGCCGCGGA ATCACTTCGG GTTCATGGAC GGGACTGCCA ATCCCGATGT CGCCGACGCG
GCTCAGATGG GCCGGTTGGT GTGGGTGGAT CCGGCGAGAA ATCCGGCGTG GGCGGTCGGG
GGCAGCTATC TGAGTGTGCG GTTGATCCGG ATGTTGACCG AGTTCTGGGA CCGGGTGTCG
CTCGGGGAGC AGGAGAACAT GTTCGGGCGG CGGCGCGGGA GCGGGGCTCC GTTGTCCGGG
CATGTGGAGA CCGATGCGCC GGACTACTCC AATGACCCCA CCGGGGAGAC GATCCCGCTG
ACCAGTCACA TCCGGTTGGC CAATCCGCGG AGCGCGGCCA CCGACGGTTC GCGGATCCTG
CGGCGCGGCC ACAACTACGA CCGCGGGGTC GATCCGAACG GCGACCTCGA CATGGGTCTG
ATCTTCACGT GCTACCAGCA GGACGTGCAC CGGCAGTTCG AGACGGTGCA GAACCGCCTG
AGCGGAGAGC CGCTGGCCGA TTACATCGCG CCGTTCGGCG GCGGGTATTT CTTGGTACTC
CCGGGTGTTT CGCCGGGTTC GGACTTCTTC GGGTCGGCGC TGCTGGCGTG A
 
Protein sequence
MTASIGRRSL LRAAGIGGAA AAATAAGTGV ALTRDTASAA AVSDGAVVAP APAPSFRGPH 
QAGVLRAAAP ATIMLALDVT AADKAGLVEL FRTLTARAAF LTSGGLPDQV GVAGPPSDSG
TLGPEVAADN LTVTLGVGSS LFDGRFGLAS RKPAGLFPMP VFPNDDLDQG QCHGDLSLQL
SADHSDTVLH ALRDIMRGVR GAAQIRWRID GFVSPPRPWG TPRNHFGFMD GTANPDVADA
AQMGRLVWVD PARNPAWAVG GSYLSVRLIR MLTEFWDRVS LGEQENMFGR RRGSGAPLSG
HVETDAPDYS NDPTGETIPL TSHIRLANPR SAATDGSRIL RRGHNYDRGV DPNGDLDMGL
IFTCYQQDVH RQFETVQNRL SGEPLADYIA PFGGGYFLVL PGVSPGSDFF GSALLA