Gene Caci_7404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7404 
Symbol 
ID8338774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8589248 
End bp8590054 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content72% 
IMG OID644960484 
Productlipoate-protein ligase B 
Protein accessionYP_003118071 
Protein GI256396507 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0321] Lipoate-protein ligase B 
TIGRFAM ID[TIGR00214] lipoate-protein ligase B 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGACG AACGTGGTAT CTCGGTCCTC CGCGCCGGCT TCGGCGCGGA GGCCGTTCCG 
TATCTGGCGG CGTGGGATCT CCAGCGCGAG GTCCACGCCC AGCGTGTCGC CGACGAGATC
GACGACACCC TGATCCTGCT GGAGCACCCG CCGGTGTTCA CCGCGGGCCG CCGCACCTCG
CCGGAGGAGC GGCCCACCGA CGGCACTCCG GTCCTCGACG TGGACCGCGG CGGCCGCATC
ACCTTCCACG GGCCCGGGCA GCTGGTCGGC TATCCGATCC TGCGGCTGCC GGAGGCGATG
GACGTGGTCG GCCACGTGCG CCGGCTGGAG GAGGCGATGA TCCGGGCCTG CGCCGAGCTG
GGCCTGGAGA CCACCCGGAT CCACGGCCGC AGCGGCGTGT GGATTCTGGG CGAGGAGATC
GAGCGCGAGG ACCTGGGCGG CCTGAAGCTC CAGCTGAAGA CGGTCGGCGC GCCGGTGGAC
GACGACGAGG AGTTCGACCC GCGGCTGGCC GGCCCGGAGT ACGCGCCGTC CAACGCCGGG
CAGCGCCGGG CCGACCGCAA GCTGGCGCAG ATCGGCGTGC GCGTCGCCAA GGGCGTGACC
ATGCACGGCT TCTCCATGAA CTGCGACGTC GACCTGGCCT GGTTCGACAA GATTATCCCC
TGCGGCATCC GGAACGCCGG AGTCACCTCG CTGTCGGCCG AACTCGGCCG GGACGTCACC
GTCGAGGAGG TCGCGCCGCT GGTCGCCCGG CACCTCGACG ACGTGGTATC CGAGGCCTAC
GGGCTCGTCG GCGCCGGGAA GGAATAG
 
Protein sequence
MSDERGISVL RAGFGAEAVP YLAAWDLQRE VHAQRVADEI DDTLILLEHP PVFTAGRRTS 
PEERPTDGTP VLDVDRGGRI TFHGPGQLVG YPILRLPEAM DVVGHVRRLE EAMIRACAEL
GLETTRIHGR SGVWILGEEI EREDLGGLKL QLKTVGAPVD DDEEFDPRLA GPEYAPSNAG
QRRADRKLAQ IGVRVAKGVT MHGFSMNCDV DLAWFDKIIP CGIRNAGVTS LSAELGRDVT
VEEVAPLVAR HLDDVVSEAY GLVGAGKE