| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7348 |
|---|
| Symbol | |
|---|
| ID | 8338718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 8531292 |
|---|
| End bp | 8532473 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644960429 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_003118016 |
|---|
| Protein GI | 256396452 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0868629 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCAATC CCGACACCAC CCCCGGCACC CCCCGCCTGC TGCGGTCGAT CAACGACCGC
TCGGCGCTGG AGCTGCTCCT CGAGCACGGT CCGCTGACCC GTACGCGCAT CGGCGCGCTG
ACCGGGCTGT CCAAGCCCAC CGCCAGCCAA CTGGTCGACC GGCTGCTGAC CGCCGACCTG
ATCGTCGCCG CCGGCACCGC CGCCGGCGGA CCCGGACCCA GCGCGCAGCT GTACGCGGTG
AATCCGGCCG CCGGCCACGC CGGCGGGGTC GACGTCACCC ACACCCGGGT CACCGCCGCC
GTCGCCGACC TGGCCGGCGA GGTGGCCGGC GAGTTCGAGG TCCCGGTCGT CGGCCGGACC
GCGGCCGGCA GCGTGGAGCG GGTCCGCGAC GCGCTGCACG GCGCCGCCGA GGCCGCCGGG
GTCGCCCCCG AAGCGGTGCG GCACGTGGTG ATCGGCGTGC CCGGCGCCCC GCATCCGCAG
ACCGGCCAGC TCGGCTTCGC CCGCGACCTG CCCGGCTGGC ACGGCGGCAA CCTGTCCCGG
CTGCGCGAGC TGCTGGGCGT GCGGGTCGAG GTGGAGAACG ACGTCAACCT CGCCGCCATC
GCCGAGCAGC ACCTGGGCCA GGCCCGCGGC GCCGACGACT TCGTCGTGTT CTGGATGGGC
AACGGCATCG GGCTGGCGAT CGTGCAGGAC GGCCGCTTCG TTCGCGGCGC GACCGGCGGC
GCCGGCGAGA TCGGCTACAT GCCGGTCGCC CTGGATCCGC AGGACCCGCT GACGCGCTCG
CCCAAACCGG TGAAGAACAC CTTCCAGAAC ATCGCCGGCC GCCCCGCGGT CCTGCACCTG
GCCCGTGAGC ACGGCATCCG CGTCGACGAC CACTCCGAGG CCGTCCGGCG CGCGGTGGAG
ACCGGCAGCA CCGAGATACT CACCACCCTG GCCCGGCGCG CGGCGCGCGG GCTCGCCCCG
GTCCTGGCGG TCCTGGACCC CTCACTCGTG GTCCTGTCCG GCGGCACCCT GCGCGCCGGC
GGCGACCTCC TCAAAGACCT GATCACGCAC GAGCTGCACG CCGTGGCGGT CCCCCGCCCC
ACGCTCGCGG TGTCCACCGT GGAGGGCAAC CCGGTCCTGG CCGGAGCCAT CCACGCGGCG
CTGCGGACGG TGCGCGAAGA CCTCTTCAAC CGCGGGGTGT AG
|
|---|
| Protein sequence | MANPDTTPGT PRLLRSINDR SALELLLEHG PLTRTRIGAL TGLSKPTASQ LVDRLLTADL
IVAAGTAAGG PGPSAQLYAV NPAAGHAGGV DVTHTRVTAA VADLAGEVAG EFEVPVVGRT
AAGSVERVRD ALHGAAEAAG VAPEAVRHVV IGVPGAPHPQ TGQLGFARDL PGWHGGNLSR
LRELLGVRVE VENDVNLAAI AEQHLGQARG ADDFVVFWMG NGIGLAIVQD GRFVRGATGG
AGEIGYMPVA LDPQDPLTRS PKPVKNTFQN IAGRPAVLHL AREHGIRVDD HSEAVRRAVE
TGSTEILTTL ARRAARGLAP VLAVLDPSLV VLSGGTLRAG GDLLKDLITH ELHAVAVPRP
TLAVSTVEGN PVLAGAIHAA LRTVREDLFN RGV
|
|---|
| |