Gene Caci_7319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7319 
Symbol 
ID8338688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8502000 
End bp8503298 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content65% 
IMG OID644960401 
Productputative DNA-binding protein 
Protein accessionYP_003117989 
Protein GI256396425 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000491826 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000376274 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGCGGCG CCTTGGACAG CTGGCACATG GGGCGGGTGT TCACGGCATA CCGCGCCCAT 
CCTTACCACG GCCGGGTGTT GTCCCAGGAA CTTGTCGCTG GCTGGCTCAA TCTGACCCAA
GCCCAGCTCA GTCGCATCGA GAGCGGCCGG GCACCGGAAG AACTGAGCAA GCTGACGTAC
TGGTCGACGG TGCTCCGTAT CCCCTCGGTT CTGTTGTGGT TCAAGGTACG GGGTGAGCGG
ACACCGCAGA CGACGACCAG AGAGCATCCA GCGCCGATTC GGCTGGCGCC ACTCCACAAA
GCCGCTGAAA ACTCGGCGAC CGCCCGCACC ATGGGCTTGC TTGCTAGCTT GACCGCAAAC
CGTGTGCCAG CCACGACGGC CGCGGTGCCG TTGAAGGCCG TGGGGGCCTT CGACGGTTTG
TCCCTCGCCG AAAGCGCCTC GCAGTTGCTC GGGCTGTTCC TCCAACTCGA CGACCAGCTC
GGCGGTGATG TGCTGTATGC ACCCTTGTCG CAATACGTGG CACGTATGGC CGTGGCAGTC
GAAGTAGATC CCAGTGACGG CCTCTTGGCG TTCGGGCAGC TCAGCCAGAT GGCCGGCTGG
TTGGCCGTGG ACGGCAACCG GCATGGCGAA GCCCGGCGTT TCCTGACCAC CGCCGTCTAC
GTCGGGCACG AAGCCGACGA TCCTGGCCTG GCGGCCAGTG CCACGGCCTA CATGAGTCTG
CACGCCATGT ACCGCGGTGA ACCCGGAACG GCGTTGGCGC TGGCGAAGAC CGCCCGCGCC
ACTGATGAGT CAGCACTGAC GCCACTGACC AGAACAATGC TCGCCACTCG TGAAGCCCGC
GCCCACGCCG GCCTGGGCAA CGAGCGGGAG TGCTTGCGTG CACTCGACGA CACGCGCAGC
TCGTACGACG GCAACGGTCA GGTCGAAGAA CCGCTGTGGC TCTCCTACGT CGACAAGGTC
GAAGTGGCTG CCCAGGAAGG GGCGTGCTAC CTCGGGCTTG GACGGCCGCG AGAGGCCGAA
GCCGCACTGA CCAACGCGCT TTCTCTGCTG GACGAGCATG CACCACACCG CGTGCGTGAC
CGCGTCCATT ACCTGTCTCG TCTGGCGAAG ACGCATCTGC TGGTGTCAGA TGTCGAGCAG
GCCTGCGCCG TCGCTACCGA AGCGTTACAG CTCAGCGAAG CTATTGGGTC AGCTCGCGTA
GCCGAACGGC TGAGTGAGTT CCGTGAAGCT CTTGCGCCGT TCGCTGACAC GCGGGCAGGT
CGGGAGTTTG CGGAGCGACT CAAGCAGACG AGGCGATAG
 
Protein sequence
MRGALDSWHM GRVFTAYRAH PYHGRVLSQE LVAGWLNLTQ AQLSRIESGR APEELSKLTY 
WSTVLRIPSV LLWFKVRGER TPQTTTREHP APIRLAPLHK AAENSATART MGLLASLTAN
RVPATTAAVP LKAVGAFDGL SLAESASQLL GLFLQLDDQL GGDVLYAPLS QYVARMAVAV
EVDPSDGLLA FGQLSQMAGW LAVDGNRHGE ARRFLTTAVY VGHEADDPGL AASATAYMSL
HAMYRGEPGT ALALAKTARA TDESALTPLT RTMLATREAR AHAGLGNERE CLRALDDTRS
SYDGNGQVEE PLWLSYVDKV EVAAQEGACY LGLGRPREAE AALTNALSLL DEHAPHRVRD
RVHYLSRLAK THLLVSDVEQ ACAVATEALQ LSEAIGSARV AERLSEFREA LAPFADTRAG
REFAERLKQT RR