Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7319 |
Symbol | |
ID | 8338688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8502000 |
End bp | 8503298 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644960401 |
Product | putative DNA-binding protein |
Protein accession | YP_003117989 |
Protein GI | 256396425 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000491826 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00000000376274 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGCGGCG CCTTGGACAG CTGGCACATG GGGCGGGTGT TCACGGCATA CCGCGCCCAT CCTTACCACG GCCGGGTGTT GTCCCAGGAA CTTGTCGCTG GCTGGCTCAA TCTGACCCAA GCCCAGCTCA GTCGCATCGA GAGCGGCCGG GCACCGGAAG AACTGAGCAA GCTGACGTAC TGGTCGACGG TGCTCCGTAT CCCCTCGGTT CTGTTGTGGT TCAAGGTACG GGGTGAGCGG ACACCGCAGA CGACGACCAG AGAGCATCCA GCGCCGATTC GGCTGGCGCC ACTCCACAAA GCCGCTGAAA ACTCGGCGAC CGCCCGCACC ATGGGCTTGC TTGCTAGCTT GACCGCAAAC CGTGTGCCAG CCACGACGGC CGCGGTGCCG TTGAAGGCCG TGGGGGCCTT CGACGGTTTG TCCCTCGCCG AAAGCGCCTC GCAGTTGCTC GGGCTGTTCC TCCAACTCGA CGACCAGCTC GGCGGTGATG TGCTGTATGC ACCCTTGTCG CAATACGTGG CACGTATGGC CGTGGCAGTC GAAGTAGATC CCAGTGACGG CCTCTTGGCG TTCGGGCAGC TCAGCCAGAT GGCCGGCTGG TTGGCCGTGG ACGGCAACCG GCATGGCGAA GCCCGGCGTT TCCTGACCAC CGCCGTCTAC GTCGGGCACG AAGCCGACGA TCCTGGCCTG GCGGCCAGTG CCACGGCCTA CATGAGTCTG CACGCCATGT ACCGCGGTGA ACCCGGAACG GCGTTGGCGC TGGCGAAGAC CGCCCGCGCC ACTGATGAGT CAGCACTGAC GCCACTGACC AGAACAATGC TCGCCACTCG TGAAGCCCGC GCCCACGCCG GCCTGGGCAA CGAGCGGGAG TGCTTGCGTG CACTCGACGA CACGCGCAGC TCGTACGACG GCAACGGTCA GGTCGAAGAA CCGCTGTGGC TCTCCTACGT CGACAAGGTC GAAGTGGCTG CCCAGGAAGG GGCGTGCTAC CTCGGGCTTG GACGGCCGCG AGAGGCCGAA GCCGCACTGA CCAACGCGCT TTCTCTGCTG GACGAGCATG CACCACACCG CGTGCGTGAC CGCGTCCATT ACCTGTCTCG TCTGGCGAAG ACGCATCTGC TGGTGTCAGA TGTCGAGCAG GCCTGCGCCG TCGCTACCGA AGCGTTACAG CTCAGCGAAG CTATTGGGTC AGCTCGCGTA GCCGAACGGC TGAGTGAGTT CCGTGAAGCT CTTGCGCCGT TCGCTGACAC GCGGGCAGGT CGGGAGTTTG CGGAGCGACT CAAGCAGACG AGGCGATAG
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Protein sequence | MRGALDSWHM GRVFTAYRAH PYHGRVLSQE LVAGWLNLTQ AQLSRIESGR APEELSKLTY WSTVLRIPSV LLWFKVRGER TPQTTTREHP APIRLAPLHK AAENSATART MGLLASLTAN RVPATTAAVP LKAVGAFDGL SLAESASQLL GLFLQLDDQL GGDVLYAPLS QYVARMAVAV EVDPSDGLLA FGQLSQMAGW LAVDGNRHGE ARRFLTTAVY VGHEADDPGL AASATAYMSL HAMYRGEPGT ALALAKTARA TDESALTPLT RTMLATREAR AHAGLGNERE CLRALDDTRS SYDGNGQVEE PLWLSYVDKV EVAAQEGACY LGLGRPREAE AALTNALSLL DEHAPHRVRD RVHYLSRLAK THLLVSDVEQ ACAVATEALQ LSEAIGSARV AERLSEFREA LAPFADTRAG REFAERLKQT RR
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