Gene Caci_7284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7284 
Symbol 
ID8338652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8464151 
End bp8465023 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content75% 
IMG OID644960365 
Productrod shape-determining protein MreC 
Protein accessionYP_003117954 
Protein GI256396390 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTGACG ACAAGCGGAC GAGGCTGCTG CTGGCGGTAC TGCTGGCGGC GGCCTTCGCC 
ATGATCACCG TGGACGCCCG GGGCGGGCCG CGCTCGCCGC TGCAGCCGCT GCGCTCCGGC
GGCGAGGCCG TGCTCGGCCC GGTCGCGCGC TCGGTCGCGG CGGCCGAGCG GCCGGTCGGC
GACTTCGTGC ACGGACTCGG CCACAGCGAG CAGGACAAGA AGGAGATCGC GCGGCTCAAG
ACGCAGAACG CGGCGCTGCG CGTGCAGTCC GAGACCGCCG CCGACGTCCG CGCCCGGGCC
GCCGAGCTCG ACAAGCTGCT GCACGTCGCG ACGGTCGGCG GCTACCGGAC GATCCCGGCC
CGGGTGATGT CCTTCGCCCC GCAGCAGCAG GGCACGTGGT CGGCGACCAT CGACGCCGGC
TCGATGGACG GGATCAAGCC CGGCATGACC GTGCTCGACG GCGAAGGACT GGTCGGACGC
ACCGTCGCGG TCGGCCGCGA CACCTCGACC GTGCTGCTGG CCGACGACCC GCGCTTCATC
GTGGGCGTGC GGACCCCCGG GACCGGCGGC GCCGGCGGCG GGCAGGTCGG GCTGGCCACC
GGCGGCGGGA ACGGGGCTTT GAGCGTGCAG TTCTTCGACC CCCAGGCCGA CATCCCGCTC
GGCACGCCGG TGCTGACCTT CGGCTCGGCC GGCGGCACGC CGTTCGTGCC CGGCGTGCCG
CTGGGCACCG TGACCTCGGT GCAGCCCACG CCCGGCGCGC TGACCCGGAC CGCGATCGTG
AAGCCGTACG TGGCCTACGA CGGTCTGCAG ACCGTCGGCG TCGTGGTCGA GCCGCCGCGC
ACCGACCCGC GCGACGCGCT GGTGGCGCAC TGA
 
Protein sequence
MRDDKRTRLL LAVLLAAAFA MITVDARGGP RSPLQPLRSG GEAVLGPVAR SVAAAERPVG 
DFVHGLGHSE QDKKEIARLK TQNAALRVQS ETAADVRARA AELDKLLHVA TVGGYRTIPA
RVMSFAPQQQ GTWSATIDAG SMDGIKPGMT VLDGEGLVGR TVAVGRDTST VLLADDPRFI
VGVRTPGTGG AGGGQVGLAT GGGNGALSVQ FFDPQADIPL GTPVLTFGSA GGTPFVPGVP
LGTVTSVQPT PGALTRTAIV KPYVAYDGLQ TVGVVVEPPR TDPRDALVAH