Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7277 |
Symbol | |
ID | 8338645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8454923 |
End bp | 8455492 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644960358 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003117947 |
Protein GI | 256396383 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGAGACG GCACGCCATC GGACTTCGCC ACCCAGATCG GCGCACGCAT CCGACGCCTG CGCCTGGAAC GCGGCGTCAG CCTCTCGGCG CTGGCCCGCG ACGCCGCCGT CGGCAAAGCC ACCCTCTCCG GTCTGGAAGA CGGCTCGCGC GGCAACCCCA CGATCGAGAC CCTGTACGCG ATCGCCGGCC GCCTCGGCGT CCCCATCGGC GCGCTGCTCC CCGATCCCCC GCACCCCGGC GAGAAACCGC TGGAGACGAT CCACGGAACC GCGGTGTCGG CCTCGCTCCT GGAGACGTTC TCCGACGCGG ACGCCGACAC CGAACTCTTC CGGCTCCACA TCCGCCCCGG CCATGAGCAG CTCTCCCCCG CGCATCCGCC GGGAACGGTC GAATACCTCA CCGTCTTCAC CGGGACAGCG CGCGTCGGCC GCCCCGACGC GTTGCTCACC GTCCCGCCCG GCGCGCATGT GTCATGGACG GCCGACGTGC CGCACACCTA CACCGCGATC AGCGACGACG ACGTCTATGC CAGCCTGCTG ATTCGCACTC CCCGGCCGCC CGAAAGCTAG
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Protein sequence | MGDGTPSDFA TQIGARIRRL RLERGVSLSA LARDAAVGKA TLSGLEDGSR GNPTIETLYA IAGRLGVPIG ALLPDPPHPG EKPLETIHGT AVSASLLETF SDADADTELF RLHIRPGHEQ LSPAHPPGTV EYLTVFTGTA RVGRPDALLT VPPGAHVSWT ADVPHTYTAI SDDDVYASLL IRTPRPPES
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