Gene Caci_7277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7277 
Symbol 
ID8338645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8454923 
End bp8455492 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content71% 
IMG OID644960358 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003117947 
Protein GI256396383 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAGACG GCACGCCATC GGACTTCGCC ACCCAGATCG GCGCACGCAT CCGACGCCTG 
CGCCTGGAAC GCGGCGTCAG CCTCTCGGCG CTGGCCCGCG ACGCCGCCGT CGGCAAAGCC
ACCCTCTCCG GTCTGGAAGA CGGCTCGCGC GGCAACCCCA CGATCGAGAC CCTGTACGCG
ATCGCCGGCC GCCTCGGCGT CCCCATCGGC GCGCTGCTCC CCGATCCCCC GCACCCCGGC
GAGAAACCGC TGGAGACGAT CCACGGAACC GCGGTGTCGG CCTCGCTCCT GGAGACGTTC
TCCGACGCGG ACGCCGACAC CGAACTCTTC CGGCTCCACA TCCGCCCCGG CCATGAGCAG
CTCTCCCCCG CGCATCCGCC GGGAACGGTC GAATACCTCA CCGTCTTCAC CGGGACAGCG
CGCGTCGGCC GCCCCGACGC GTTGCTCACC GTCCCGCCCG GCGCGCATGT GTCATGGACG
GCCGACGTGC CGCACACCTA CACCGCGATC AGCGACGACG ACGTCTATGC CAGCCTGCTG
ATTCGCACTC CCCGGCCGCC CGAAAGCTAG
 
Protein sequence
MGDGTPSDFA TQIGARIRRL RLERGVSLSA LARDAAVGKA TLSGLEDGSR GNPTIETLYA 
IAGRLGVPIG ALLPDPPHPG EKPLETIHGT AVSASLLETF SDADADTELF RLHIRPGHEQ
LSPAHPPGTV EYLTVFTGTA RVGRPDALLT VPPGAHVSWT ADVPHTYTAI SDDDVYASLL
IRTPRPPES