Gene Caci_7235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7235 
Symbol 
ID8338603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8409639 
End bp8411114 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content75% 
IMG OID644960316 
ProductFAD linked oxidase domain protein 
Protein accessionYP_003117905 
Protein GI256396341 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATGG ACGCGCACCA CAGCCGTCGC TCGTTCGTCC GGGCCGTGAG CGTGGGAGCC 
CTGGCCGTCG GCTTCGACAC CACCTCCCGG GCCTGGGCCG CGCAGGCTCC CCAAGGCGCC
GCGGCGGACT TCCGGCGCGC CCCGCACCTG GACGGCCGCC TGCTCATCGC CCCGGCGGAC
CTGGCGCCCT ACGAGGACGA CTTCGGCCAC CTGGTCCACC GCACGCCGCG CGCGGCGCTG
CTCCCCGGCT CGGTCCGCGA CATCGCCGCG ATGATCGCCT TCTGCGGCCC GCTCGGCATC
CCGGTCGCCC CGCGCGGCCA GGGCCACCAG GCCTTCGGCC AGGCGCAGGC CGCCGACGGC
CTGATCGTCG ATCTGGGCCC GCTGGCCGCG ATCAGCGTCG ACCCGGCGAC GAGCACCGCG
ACGGTCGGCG CCGGCGCGGT GTGGAGCGCG GTGCTGGCCG CGAGCCTGGC CCACGGCCTC
ACCCCGCCGG TGTTCACCGA CTACATCGAG CTCTCGGTCG GCGGCACGCT GTCCGCCGGC
GGCGTCGGCG GCGCCTCGCA CCACCACGGC GCGCAGGTCG ACAACGTCGT GCAGCTCGAG
GTCGTCACCG GCACCGGACA GATCCGGACC TGCTCGGCGA CCCGCGACGC GGACCTGTTC
CACGCCGCGC TGTCCGGCCT CGGCCAGGTC GGCGTCATCA CCCGCGCGGT GATCCGCCTG
GTCCCGGCGC CGACGTCGGT GCGCAGCTAC TCGCTGGTCT ACCCGAGCGT GGCAGCCCTC
ACCGCGGCGC AGCGCAAGGC CGTCGGCGAC GGCCGCTTCG ACTGGCTGGA GGGCACGATC
CTGCCGGCGG GCGGCGGCTG GCTGTACCTC CTCGAGGGAT CAGCGTTCTA CGACGCGACC
CCGCCGGACG ACAATGCCCT GATCGGCGAC CTCGGCTCCA TCGGCGCGCC GCAGATCCAG
GACTCCGCGT ACGTCGACTT CGTGGACGAC CTGGCGCCGA CCGTGGCCGC CCTGAAGGCC
AGCGGCGAGT GGTACGACCC GCACCCGTGG TTCAACGGCT TCCTCCCCGA CACCGCCGCC
GACGCGCTGG TCACCGCCAC CATGGACGCC ACCACACCAG CCGACCTCGG CGCGAGCGGC
CTGGTCCTGC TGTATCCGGT CCCGACGGCG AAGTTCACGA CGCCGCTGCT CTCGGTCCCG
GACGGCGAGA TCGCCTTCCT GTTCGCGGTC CTGCGCACGG CGGCCCCGGA CGGCGGCGCG
CTCCCGGCCG CGGCGCAGCT GCGGGAGAAC CGCGACCTTT ACCTGCGCGT GCAGGCCGCG
GGCGGCAAGC AGTACCCGGT CGGCGCGATC CCGATGACGC CTAGCGACTG GCGGACGCAG
TACGGCGCGC GCTGGCAGGC GTTCCGGGCG GCGAAGCGGC GCTTTGATCC GCACGGGATT
CTGGCGCCGG GACAGGGGAT TTTCGCACCT GCGTAG
 
Protein sequence
MGMDAHHSRR SFVRAVSVGA LAVGFDTTSR AWAAQAPQGA AADFRRAPHL DGRLLIAPAD 
LAPYEDDFGH LVHRTPRAAL LPGSVRDIAA MIAFCGPLGI PVAPRGQGHQ AFGQAQAADG
LIVDLGPLAA ISVDPATSTA TVGAGAVWSA VLAASLAHGL TPPVFTDYIE LSVGGTLSAG
GVGGASHHHG AQVDNVVQLE VVTGTGQIRT CSATRDADLF HAALSGLGQV GVITRAVIRL
VPAPTSVRSY SLVYPSVAAL TAAQRKAVGD GRFDWLEGTI LPAGGGWLYL LEGSAFYDAT
PPDDNALIGD LGSIGAPQIQ DSAYVDFVDD LAPTVAALKA SGEWYDPHPW FNGFLPDTAA
DALVTATMDA TTPADLGASG LVLLYPVPTA KFTTPLLSVP DGEIAFLFAV LRTAAPDGGA
LPAAAQLREN RDLYLRVQAA GGKQYPVGAI PMTPSDWRTQ YGARWQAFRA AKRRFDPHGI
LAPGQGIFAP A