Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7203 |
Symbol | |
ID | 8338571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8373589 |
End bp | 8374350 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644960284 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003117873 |
Protein GI | 256396309 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.277726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGGCA GCGAGACCCG CCCGGCCCGC AAAGTGGCCA CCGCCAAACG CGACCGTGTG CGCGACCACC TCCTGCAGCT GATCGACACC GCCGCCCCCG GCACGAGCCT GGACTCCGAA CGCGACCTCG CCGAGACCCT CGGCGTCTCG CGCCCCACGG TCCGCGCCGC GCTGCAGGAT CTGGCGCGCT CGGGCTACCT GGTCCGGCAC CAGGGTCGCG GCACGTTCAC CAGCCCGCGC AAGATCGACC AGGCGCTGAC CGGCGACAGC GCCGACGGTG CCGCGGCCCT GGCCGCCCCG TCCGCCGAGG GCACGTGGAC CAGCCACGTC GTGACCTTCC GCACCTCCGC GGCCGGACCG TCGCGCGCGA CCCGGTTCGA CATCGCCGTC GACGCGCCGA TCCTGCGCAT CGTGCGAGTG CGGCTGGTCG AGGGCGAGCC GATCGCGATC GAGCGCCTGG ACGTCCCGGC GGCATTGGTC CCGAATCTGA AGCCGGACGA CGTGGAGTCC GGCAACTTCT ACCACCTGCT GCGCGACCGG CACGGCATCG TGGTCTCCGA CGCCGTGCAG ACCATGGAGC CGACGGTCGC CAACCCGGAA CAGGCCGAAC TGCTCGACAT CGAGGTCTAC GCGCCGCTGC TGCAAGTCGA GCGCACCACC AAGGACACGA CCGGACGCGT GGTGGAGTTC GCGCACTCGG TGTATCGCGG GGACCGCTAC CGGATCACGA CACGGCTGCA TCTGGACGCG ACCTCTGGCT GA
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Protein sequence | MTGSETRPAR KVATAKRDRV RDHLLQLIDT AAPGTSLDSE RDLAETLGVS RPTVRAALQD LARSGYLVRH QGRGTFTSPR KIDQALTGDS ADGAAALAAP SAEGTWTSHV VTFRTSAAGP SRATRFDIAV DAPILRIVRV RLVEGEPIAI ERLDVPAALV PNLKPDDVES GNFYHLLRDR HGIVVSDAVQ TMEPTVANPE QAELLDIEVY APLLQVERTT KDTTGRVVEF AHSVYRGDRY RITTRLHLDA TSG
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