Gene Caci_7196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7196 
Symbol 
ID8338564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8364291 
End bp8365394 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content67% 
IMG OID644960277 
ProductChitinase 
Protein accessionYP_003117866 
Protein GI256396302 
COG category[R] General function prediction only 
COG ID[COG3179] Predicted chitinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTTA CTCACGCACC GAAACGCACG CGGCTCCTAG CCTTGCTGGC TGCTCTGGCC 
AGCGTGCTCG GGCTGACCCT CATCGCCATG CCCGCCTCGC CGGCCCACGC CGCGACCGCC
TGCGCCGCGC CGTGGAACTC CGGCGTCGCG TACACCGGCG GGCAGACCGC GTCGTACAAC
GGGGACAACT GGTCCGCGAA GTGGTGGACC CAGGGCGACA TCCCCGGCAA CAACGGCCAG
AACGTCTGGG CCGATCAGGG TGCGTGCTCC TCGAGCGGGG GCGGAGGCGG CGGGGGCAGC
AGTTGCAGCT ACCCGGCTTG GGTCGCCGGG CAGTACTACA ACGTCGGCGC CATCGTCACG
TACACGCCGA ACGGCGGGCT CTACATAGCC ACCAACGCCA ATCCCGGCTA CGACCCGACC
ATCAGCACCT GGTACTGGTC GCCGTACACC TGCACCGGCG GCGGTGGTGG GGGCGGTGGC
GGTGGAGGCG GCTCCAACGG CTTCGTCGTC AGTGAAGCGC AGTTCAACCA GATCTTCCCG
AACCGGAATT CCTTCTACAC CTACTCCGGT CTGGTCGCGG CGCTCAGTGC CTACCCCGCG
TTCGCCACCA CCGGCAGCGC CACCGTGCAA AAGCAGGAAG CCGCAGCGTT CCTGGCCAAT
GTGGACCACG AAACCGGCGG CCTCGTCTAC ATCAACGAAA TCGACCAATC CGGCAACTAC
TGCGCCAGCG AATCCTACGG CTGCCCCGCC GGAACCTACG CCTACTACGG CCGCGGACCC
CTGCAACTGT CCTGGAACTT CAACTACTAC GCCGCCGGCA ACGCCCTCGG CATCGACCTC
CTCGACAACC CCAACCTCGT CGCCACCGAC CCAGCCACCT CCTGGAAAAC CGCCATCTGG
TACTGGTTCA CCGGCACCGG CAACGGCTCC CTGACCTCCC ATCAGGCCAT GACAACCGGA
GCCGGCTTCG GCGCCACCAT CCGCGCCATC AACGACATCG AATGCAACGG CGGCAACACC
GGCGAGATGC AAGACCGCGT CAACGACTAC GAATCCATCG CCGGGGTGCT CGGCGTGACT
CCGGGCGGGA ACCTCACCTG CTGA
 
Protein sequence
MTLTHAPKRT RLLALLAALA SVLGLTLIAM PASPAHAATA CAAPWNSGVA YTGGQTASYN 
GDNWSAKWWT QGDIPGNNGQ NVWADQGACS SSGGGGGGGS SCSYPAWVAG QYYNVGAIVT
YTPNGGLYIA TNANPGYDPT ISTWYWSPYT CTGGGGGGGG GGGGSNGFVV SEAQFNQIFP
NRNSFYTYSG LVAALSAYPA FATTGSATVQ KQEAAAFLAN VDHETGGLVY INEIDQSGNY
CASESYGCPA GTYAYYGRGP LQLSWNFNYY AAGNALGIDL LDNPNLVATD PATSWKTAIW
YWFTGTGNGS LTSHQAMTTG AGFGATIRAI NDIECNGGNT GEMQDRVNDY ESIAGVLGVT
PGGNLTC