Gene Caci_7187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7187 
Symbol 
ID8338555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8358241 
End bp8358723 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content65% 
IMG OID644960268 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_003117857 
Protein GI256396293 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCTG AAGCACATTC TCTACGGACG TCCGCCGGCA TCGAGACCGG GTCCGACCTT 
GACGGCGAGG CGGGGACCGA GGCGGAAACC GTGGTGATCC AGGTACCGGC TGACGCCGAC
TATCTGCCCA TCATCCGGTC GGCGAGCGCC CACGTCGCGA CCAAACTCGG GTGCACCCTC
TCGGAGGTCG CCGACCTGCG TCTGGCGGTG GACGAGGCGT GCGGTCTCCT CCTTCGTCAT
ACCGTCCGGG ACGGGGACGC GACCGACGGT GCCAACAGCG TCGGCGACTT GGTGTGCCGC
TTCATACTCG AGGGCTCGTC GCTGCGTGCG GTGCTGAGTC GTCAGGCGCG TAATGTCGCG
TCGCCGCAGA GTGATGAGTT CGGGTGGACG ATTTTGTCCG CATTGGTCGA TGACATTGTG
TGGCGGGTGG ACGGTCCGAC GGTGCACGTG GAGATTCTGA AGCGTCGTAC GGGCGGGAAG
TGA
 
Protein sequence
MDPEAHSLRT SAGIETGSDL DGEAGTEAET VVIQVPADAD YLPIIRSASA HVATKLGCTL 
SEVADLRLAV DEACGLLLRH TVRDGDATDG ANSVGDLVCR FILEGSSLRA VLSRQARNVA
SPQSDEFGWT ILSALVDDIV WRVDGPTVHV EILKRRTGGK