| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7148 |
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| Symbol | |
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| ID | 8338516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 8314242 |
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| End bp | 8316002 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644960229 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003117818 |
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| Protein GI | 256396254 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.118228 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAT CCAGGCGCCG GTCACGGTCG GCCATCGCCG TCACCGTGCT GGCAACACTG
ACGATCACCG CCGGGTGCTC GTCGTCGTCC GCCAAGAAAT CCGGCTCCGG TCAGCAGGAG
GCCGCGCAGA ACGTGGCCAA GCAAGCCGTC GCGGTCGGCA CGGCTGCCGA CTCCCGGGGA
CCGGATCCGG CAGTGTCCGG CGCCAAGTCC GGCGGGACTG TCACAGTGCT CGAACACTCG
GACTTCAGCC ACCTGGACCC GGCCCGCGTC TGGTCCTCCA CCAACCAGAC CGCCGATCTG
CTGCTGACTC GCCAGCTCAC CAGCTACCAG CAGGTCGGCA ACACCACCAA GCTGGTCGGA
GACCTGGCCA CCGACACCGG GAGCAGCACC GACGGCAAGA CCTGGACCTA CCACCTCAAG
GCCGGCCTGA AGTACGAGGA CGGCAGCACG ATCACCGCTC AGGACGTGAA GTACGGCATC
GAGCGCACCT TCCAGAAGGA GCTGTCCGGC GGTCCGCAGT ACCTCCAGAT GTGGCTGACC
GGCAAGACCG ACTACTCCTC CACCTACTCA GGGCCCTGGG GCGGCCAGGA CCTGCCGCAG
ATCCAGACGC CCGACGCCAC GACGATCGTC TTCCACCTCG CGTCGGTGCA CGCCGACTTC
CCGTTCGCGT TGGCGATGCA GGCTTACAGC CCGCTTCCCA AGGACAAGGA CGCCAAGTCC
GCCCTGGACC AGCACCCCTT CTCCTCCGGG CCCTACAAGG TCGACAGCCA CGACATCGAC
AAGGGCATGG TCCTGTCCCG CAACACCCAT TGGGACGCGA ACACCGACCC GGTCCGCCAC
GCCTACCCCG ACCAGTGGAA GTTCGAGTTC GGGGCGCAGG ACGTCGACAT CAACCAGCGC
CTGGCGGCCG CCAACGGCGC CGACAAGGAC GCGATGACCT TCAAGGTCAC CATCGGCTCG
GACCTGGCAT CGCAGGTGAA CTCGAGCCCT GATCTGAAGG CTCGTCTGGT CAACCAGGTC
ACGCCCTTCT CAGAGTTCTA CAACATCAAC ACCCGGCGCG TGACGGACGT CAAGGTCCGC
GAAGCCCTGC TGGAGGCGTT CCCGCGCGCC CAGACGCGGC AGCTGCTCGG GGGACCGATC
TACGGCGACT TCACCACCAC GATCCTGTCG CCGGTGACCA ACGGCTACCA GGACTACGAC
CTGTACGGCG CCCCCGACAC CGGCGACCCA GCCAAGGCCA AGGCGCTGCT GGCGACGACA
TCGACGCCGC ACCCGACCAT CGTGTACGCC TACCAGGACG ACACCGCCTG GCAGCAGGGC
GCCGTCGCCA TCCAGCAGGC GCTGACCAAG GCCGGCTTCA CCGTCGTCAC CAAGGCGATC
AGCGACAAGA ACTACTACGA CGAGACGCAG AAGACTGACA ACCAGTTTGA CGTCTACTGG
GGCGGCTGGG GTCCGGACTG GCCCAGCGCC TCCTCGGTCA TCCCGCCGTT GTTCGACGGC
CGGCAGATCA CCGACGGCGG CAGCGACAAC TCGCTGCTGA ACGACCCGAC GGTGAACGCC
GAGATCGACC GGATCCAGTC CATGACCGAC CTGAGCCAGC AGAACACCGC CTGGGCCGCG
CTGGACAAGA AGATCATGCA GGAGGTCCCC ATCATCCCCT GGGTCGATCC CCGGCAGGTC
TCGCTCTATG GGCCCGGACT CGGTGGCGTC CACACCGGCT TCATCGGCAC CTGCTATCCG
CTCGACGTCT ACGTCAAGTA G
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| Protein sequence | MSASRRRSRS AIAVTVLATL TITAGCSSSS AKKSGSGQQE AAQNVAKQAV AVGTAADSRG
PDPAVSGAKS GGTVTVLEHS DFSHLDPARV WSSTNQTADL LLTRQLTSYQ QVGNTTKLVG
DLATDTGSST DGKTWTYHLK AGLKYEDGST ITAQDVKYGI ERTFQKELSG GPQYLQMWLT
GKTDYSSTYS GPWGGQDLPQ IQTPDATTIV FHLASVHADF PFALAMQAYS PLPKDKDAKS
ALDQHPFSSG PYKVDSHDID KGMVLSRNTH WDANTDPVRH AYPDQWKFEF GAQDVDINQR
LAAANGADKD AMTFKVTIGS DLASQVNSSP DLKARLVNQV TPFSEFYNIN TRRVTDVKVR
EALLEAFPRA QTRQLLGGPI YGDFTTTILS PVTNGYQDYD LYGAPDTGDP AKAKALLATT
STPHPTIVYA YQDDTAWQQG AVAIQQALTK AGFTVVTKAI SDKNYYDETQ KTDNQFDVYW
GGWGPDWPSA SSVIPPLFDG RQITDGGSDN SLLNDPTVNA EIDRIQSMTD LSQQNTAWAA
LDKKIMQEVP IIPWVDPRQV SLYGPGLGGV HTGFIGTCYP LDVYVK
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