Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7144 |
Symbol | |
ID | 8338512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8309968 |
End bp | 8310534 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644960225 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003117814 |
Protein GI | 256396250 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.251131 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGAGC GACAGTCGCC CCGGCGCCCC GGCGGACGCG GCGCCCGCGT CACCGCGGCG GTCCACCAGG CCGTCACCGA TCTGATCAGC GAGCGCGGCT ACGGCATGTT CTCCGTGGCC GACGTCGCAG CCCGCGCGGG TGTGGCGGAC AGCAGCGTCT ACCGCCGGTG GGGCAGCCTG GAGACGCTGC TCACCGACGC GGCGCTCAGC GGCCTCAACA CGCGCTCGCC CATGCCCGAC ACCGGGAGTC TGGCCGGCGA CCTGCGCACG TACGCGGCCG CCGTGGCCCG CGAGATCACC GGACCCGACG GCCCGGCGCT GGTGCACCTG GCCATCGCCC TGTCGAAGGC CGGCGACCAA GGGCTGCGGG CGCGCGAGGA GCTGCTGGCC GCACGCGCCC AGCAGCTCCA GTCCATGCTC GATCGCGCGG GCGAACGCGG CGAGCGGGTC CTCGACCCGC TCGACGTGCT GGACCACGTG CTGGCGCCGA TGTATATCCG GGTCCTGCTC GGTGTGGATC AGCTGACTCC GGAGTACGTC GACGGGCTGG TCGACCGGTT GCTGTGA
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Protein sequence | MDERQSPRRP GGRGARVTAA VHQAVTDLIS ERGYGMFSVA DVAARAGVAD SSVYRRWGSL ETLLTDAALS GLNTRSPMPD TGSLAGDLRT YAAAVAREIT GPDGPALVHL AIALSKAGDQ GLRAREELLA ARAQQLQSML DRAGERGERV LDPLDVLDHV LAPMYIRVLL GVDQLTPEYV DGLVDRLL
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