Gene Caci_7144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7144 
Symbol 
ID8338512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8309968 
End bp8310534 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content74% 
IMG OID644960225 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003117814 
Protein GI256396250 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.251131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAGC GACAGTCGCC CCGGCGCCCC GGCGGACGCG GCGCCCGCGT CACCGCGGCG 
GTCCACCAGG CCGTCACCGA TCTGATCAGC GAGCGCGGCT ACGGCATGTT CTCCGTGGCC
GACGTCGCAG CCCGCGCGGG TGTGGCGGAC AGCAGCGTCT ACCGCCGGTG GGGCAGCCTG
GAGACGCTGC TCACCGACGC GGCGCTCAGC GGCCTCAACA CGCGCTCGCC CATGCCCGAC
ACCGGGAGTC TGGCCGGCGA CCTGCGCACG TACGCGGCCG CCGTGGCCCG CGAGATCACC
GGACCCGACG GCCCGGCGCT GGTGCACCTG GCCATCGCCC TGTCGAAGGC CGGCGACCAA
GGGCTGCGGG CGCGCGAGGA GCTGCTGGCC GCACGCGCCC AGCAGCTCCA GTCCATGCTC
GATCGCGCGG GCGAACGCGG CGAGCGGGTC CTCGACCCGC TCGACGTGCT GGACCACGTG
CTGGCGCCGA TGTATATCCG GGTCCTGCTC GGTGTGGATC AGCTGACTCC GGAGTACGTC
GACGGGCTGG TCGACCGGTT GCTGTGA
 
Protein sequence
MDERQSPRRP GGRGARVTAA VHQAVTDLIS ERGYGMFSVA DVAARAGVAD SSVYRRWGSL 
ETLLTDAALS GLNTRSPMPD TGSLAGDLRT YAAAVAREIT GPDGPALVHL AIALSKAGDQ
GLRAREELLA ARAQQLQSML DRAGERGERV LDPLDVLDHV LAPMYIRVLL GVDQLTPEYV
DGLVDRLL