Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7113 |
Symbol | |
ID | 8338480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8276450 |
End bp | 8276767 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644960194 |
Product | transcriptional regulator, TrmB |
Protein accession | YP_003117784 |
Protein GI | 256396220 |
COG category | [K] Transcription |
COG ID | [COG0640] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0721049 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTGG CCGCAGCCTT CCAAGCCCTC GGCGAACCCC GCCGCCTGGC CATCGTCGAA CTGCTCCGCG AAGGCGAGAA ATCCGTCGGC GAGCTCTCCG AGCGCCTCGA CGCGAGCCAG CCGGCCGTCT CCAAGCACCT GCGCGCCCTC CGCGAAGCCG GACTGGTCGA CGTACGCCCC GACGCACAGC ACCGCTTCTA CCGCCTACGC CCCGAACCAC TCGCCGAGCT CGACGACTGG CTGGCGCCGT ACCGGTGGCT GTGGACCAGG AGCATGGACC GGCTGGAAGC CCATCTCGAA GACCGGAGGA AGCCATGA
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Protein sequence | MTVAAAFQAL GEPRRLAIVE LLREGEKSVG ELSERLDASQ PAVSKHLRAL REAGLVDVRP DAQHRFYRLR PEPLAELDDW LAPYRWLWTR SMDRLEAHLE DRRKP
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