Gene Caci_7113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7113 
Symbol 
ID8338480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8276450 
End bp8276767 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content69% 
IMG OID644960194 
Producttranscriptional regulator, TrmB 
Protein accessionYP_003117784 
Protein GI256396220 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0721049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGG CCGCAGCCTT CCAAGCCCTC GGCGAACCCC GCCGCCTGGC CATCGTCGAA 
CTGCTCCGCG AAGGCGAGAA ATCCGTCGGC GAGCTCTCCG AGCGCCTCGA CGCGAGCCAG
CCGGCCGTCT CCAAGCACCT GCGCGCCCTC CGCGAAGCCG GACTGGTCGA CGTACGCCCC
GACGCACAGC ACCGCTTCTA CCGCCTACGC CCCGAACCAC TCGCCGAGCT CGACGACTGG
CTGGCGCCGT ACCGGTGGCT GTGGACCAGG AGCATGGACC GGCTGGAAGC CCATCTCGAA
GACCGGAGGA AGCCATGA
 
Protein sequence
MTVAAAFQAL GEPRRLAIVE LLREGEKSVG ELSERLDASQ PAVSKHLRAL REAGLVDVRP 
DAQHRFYRLR PEPLAELDDW LAPYRWLWTR SMDRLEAHLE DRRKP