Gene Caci_7111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7111 
Symbol 
ID8338478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8274891 
End bp8275505 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content69% 
IMG OID644960192 
Productnitroreductase 
Protein accessionYP_003117782 
Protein GI256396218 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.109168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTCC AAGATGTGAT CCGCAAGCGG AAGATGGTCC GGGCGTTCAC GACCGAGCCC 
ATCGCGCCGG AGGTGAGCGA GCGCCTGCTG CGCGCGGCGA ACCGCGCGCC GTCCGCGGGC
TTCTCGCAGG GCTACGCGAT GCTCGTGCTG GAGTCCGCCG AGGACCGTAC CGCCTTCTGG
GAGGCGATGG ATCCCGAGGG CGAGTACGAG GGCACCGCGC TGCGCAACGC CCAGATGATC
GTGATCCCCT GCTCCAACAA GGAGATCTAC ATCGACCGGT ACGCCCGCCC CGACAAGGGC
TGGACGGACC GGGACGAGGC CCGCTGGCCG GTGCCCTTCT GGCACATCGA CACCGGCATG
CTGACGATGC TGCTGCTGCT CGCGGTGGTC GAGGAGGACC TCGGCGCGCT GTACTTCGGG
ATCCCGCCGG AGTCGATCGG CAACGTGCGC GCCGAGTTCG GCATCCCGGC GGAGTTCACG
CCGATCGGCG CGGTCGCCAT CGGGCATCCG GACCCCGACC GGGACGCCCG GCAGAAGACG
TCGCGCAAGA CCATCAAGCG GCGGACGGTC GAGGACATCA CGCACCGCGG GCGTTGGCAC
ACCGACGCGG AGTGA
 
Protein sequence
MEFQDVIRKR KMVRAFTTEP IAPEVSERLL RAANRAPSAG FSQGYAMLVL ESAEDRTAFW 
EAMDPEGEYE GTALRNAQMI VIPCSNKEIY IDRYARPDKG WTDRDEARWP VPFWHIDTGM
LTMLLLLAVV EEDLGALYFG IPPESIGNVR AEFGIPAEFT PIGAVAIGHP DPDRDARQKT
SRKTIKRRTV EDITHRGRWH TDAE