Gene Caci_7108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7108 
Symbol 
ID8338475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8269813 
End bp8270976 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content73% 
IMG OID644960189 
Producthypothetical protein 
Protein accessionYP_003117779 
Protein GI256396215 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.273158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.753701 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATTCAC GCGTGGTGAA CGACGGGGAA CGCCGGGCAC GGCTGGCGTC GCGACATCTG 
TTGGCTCCCG GACGCAGGGC GGCGACACCG GAGGCGGTGG TCGACGCGCT CGTCGCGCTG
CACTCCACCG ACGCCGCGAC GGTCTACCTC TCGGCGCTGG CCCGGCTGGA GAAGCCGGAC
ACCGCCGACG TCGAGCGCGC GCTCTACGAC GACCGGACAC TGGTCCGCAT GCACGGCATG
CGGCAGACGC TGTTCGTGGT CCCGGCTGAT CTGGCTCCGG TGGTGCAGGC TTCGACGACG
CGTGAGATGT GGGGCAAGGA ACGCGGTCTG CTGCTGAAGA ACGCCGTGGC CGCCGGGCTG
GATGCCGCTT GGCTGGAGCG CGTCGAGGCG GAGACGGTCG CCGAGGTCAA GCGGCGCGGA
TCGGCGACCG GCGCTGAGCT GGGCAAGGCG GTGGCTGGGC TGCGGGACCA GGTGCTGTAC
GGCAAGGGCA CCAAGTGGGA GGCCTGGCAG CCGGCCTCGG GGCGCGTGCT GCGCGTGCTC
GGCTTCGACG GCGCCGTGGT GCGCGGGCGT CCGGTCGGCT CGTGGCTGTC CAGCCAGCAC
CGGTGGGAGC CGGGCGCCGG ACACGCGGAG ATCGCGGTCG CGGACGCCCA GGCGGAGCTG
GCACGCCGCT GGCTGCGGGC GTTCGGTCCG GCGACCGAGG CGGATCTGAA GTGGTGGACC
GGCTGGAAGG TGACCGACGC CCGCAAGGCG TTGAAGGCGG TCAACGCGGT GCAGGTAGCT
GTCGGCACCG GTGTCGGCTG GGTGCTGCCG GACGACCTGG ACGAGGTCGC GGCGCCCGAG
CCGTGGGCTG CCCTCCTGCC CGGGCTCGAC CCGACGGCGA TGGGCTGGCA GGCGCGCGAG
TGGTACCTCG CTGAGGAGAT CCGGCCGCCG CTGTTCGACC GCGCGGGGAA CGTGGGACCG
ACGGTGTGGT GGAACGGCGA GGTCGTCGGC GGCTGGGCGC AGCGTGCTGA CGGGACCGTG
GCGACGAGGC TGCTGCGGGA CGTCGGGAGC GAGGCGGAGA AGGCGATCGC GGTGGAGACC
GAGCGGTGTC AGACGGCGCT GGGGGAGCAC CGGGTGACGC CGCGGTTCCG GACGCCGCTG
GAGCGCGAGA TCTCCGAGGG CTGA
 
Protein sequence
MNSRVVNDGE RRARLASRHL LAPGRRAATP EAVVDALVAL HSTDAATVYL SALARLEKPD 
TADVERALYD DRTLVRMHGM RQTLFVVPAD LAPVVQASTT REMWGKERGL LLKNAVAAGL
DAAWLERVEA ETVAEVKRRG SATGAELGKA VAGLRDQVLY GKGTKWEAWQ PASGRVLRVL
GFDGAVVRGR PVGSWLSSQH RWEPGAGHAE IAVADAQAEL ARRWLRAFGP ATEADLKWWT
GWKVTDARKA LKAVNAVQVA VGTGVGWVLP DDLDEVAAPE PWAALLPGLD PTAMGWQARE
WYLAEEIRPP LFDRAGNVGP TVWWNGEVVG GWAQRADGTV ATRLLRDVGS EAEKAIAVET
ERCQTALGEH RVTPRFRTPL EREISEG