| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7099 |
|---|
| Symbol | |
|---|
| ID | 8338466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 8258384 |
|---|
| End bp | 8259145 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644960180 |
|---|
| Product | Silent information regulator protein Sir2 |
|---|
| Protein accession | YP_003117770 |
|---|
| Protein GI | 256396206 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.190475 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.251741 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCG ACTGGCGCAG CCGTAAAGGT CCGATCGGAG TCCTGACCGG TGCGGGCATC
AGCACCGATT CCGGCATCCC GGACTTCCGG GGACCAAGGG GAGTCTGGAG CAAGGACCCG
ATCGCCGAAC TGCTGTCGAC GTACGCCAAC TACGTCGCCG ATCCGGAGCT GCGGCAGCGG
GCCTGGCTCG CCCGGCGGGA CAACCCGGCG TGGCAGGCCA AACCGAACGC CGCCCACAAG
GCGCTGGCAG ATCTGGAGCA CTCCGGCCGC TCGGTGCGGA TCATCACGCA GAACATCGAC
CGGCTGCACC ACCGCGGCGG GTCCTCGGCG CGCAAGGTGA TCGAGATCCA CGGGAACATG
TTCGACGTGG TCTGCGTCCA GTGCAGCTAC CAGACCACGA TGGAGACGAC GTTGCAGCGC
GTCGCCGACG GCGAGGCCGA CCCGCCGTGC CCGTCCTGCG GCGGCATCCT GAAGGCCGCG
ACCATCATGT TCGGGCAGAA CCTGGACCCG GCCTCGCTCT GGCAGGCCGA GCAGGTCGCC
GAGGCCTCGG AGATCTTCCT GGCGATCGGC ACCTCACTGC GCGTGGAGCC CGCCGCCTCG
CTGTGCGAGG TGGCCGTGTC CCACGGCGCC GACCTGGTGA TCGTCAACAA CGAGCCGACG
CCGTACGACC CGTTGGCCAC CGAAGTGATC CGCGAGCCGA TCGGCGAGGC GGTGCCGCGC
ATCGTCGCCG AACTGATCGC CGCCGAGAAC GGGACGCTGT AG
|
|---|
| Protein sequence | MTTDWRSRKG PIGVLTGAGI STDSGIPDFR GPRGVWSKDP IAELLSTYAN YVADPELRQR
AWLARRDNPA WQAKPNAAHK ALADLEHSGR SVRIITQNID RLHHRGGSSA RKVIEIHGNM
FDVVCVQCSY QTTMETTLQR VADGEADPPC PSCGGILKAA TIMFGQNLDP ASLWQAEQVA
EASEIFLAIG TSLRVEPAAS LCEVAVSHGA DLVIVNNEPT PYDPLATEVI REPIGEAVPR
IVAELIAAEN GTL
|
|---|
| |