Gene Caci_7098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7098 
Symbol 
ID8338465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8257870 
End bp8258370 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content67% 
IMG OID644960179 
ProductNUDIX hydrolase 
Protein accessionYP_003117769 
Protein GI256396205 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.191544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.239694 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTGC CCGAAGGCCC GTACGCCCGC CGCACCGCCC GCGTCCTGCT GATGGACAAG 
GAAGACCGCC TGCTGCTGTT CAAGTTCGGC AGCCGCAGGC GGAACCACGT CTGGCTGACT
CCCGGCGGCG GCATCGACGA GGGCGAGGCG GTGAACGTGG CGGCGGCCCG CGAACTGCGG
GAGGAGACCG GCTTGGTCGT GACGCCGGAG CAACTCGGCG AGGTGGTCGC CACGACGGGC
GGCTACGCCG AACTCGGCAG CTGGATCAAG GGGAACATCC GCGAGGACTT CTTCTTCCAC
CGCGTGGATT CGCTCAATAT CGACAGCAGC GGTTTCACCG ACTACGAACG CAAGGCCATC
GCCGAAATCC GATGGTGGTC GGTCGCGGAC CTGGAGTCCA CTGCCGAGAA CGTCGTTCCC
TGGGGTCTGG TGCCGCTGCT GAAGTCCCTC CTGCGCGACG GTCCGCCGGC AAACTTCGTC
GAGTTGCCCT GGCACCACTG A
 
Protein sequence
MPLPEGPYAR RTARVLLMDK EDRLLLFKFG SRRRNHVWLT PGGGIDEGEA VNVAAARELR 
EETGLVVTPE QLGEVVATTG GYAELGSWIK GNIREDFFFH RVDSLNIDSS GFTDYERKAI
AEIRWWSVAD LESTAENVVP WGLVPLLKSL LRDGPPANFV ELPWHH