Gene Caci_7073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7073 
Symbol 
ID8338440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8220295 
End bp8221302 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content68% 
IMG OID644960154 
ProductDNA polymerase III, delta subunit 
Protein accessionYP_003117744 
Protein GI256396180 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGGCC TGATGCCTGC TCACGTTGCT TCTCCGCCTC AGCTCGTCCT CGTTGTCGGG 
GCCGAGGAAC TGCTTGTTGA TCGTGCTGTG GCGCGGGTTG TTGCTGCGAG GCGTGCGGCT
GATCCGGAGA CTGAGGCGCG GGATCTGATG CCGGGGAGCT TCAGTGCGGG GACTTTTGCC
GAGTTGGTGA GTCCGTCGTT GTTTGGCGAG AGTCGGGTTG TGGTGGTGCG GTCGGCGCAG
GATTTGGCGG CTGAGGATGT CACCATGCTG ACCAGTGCTC TGGGTGAGCT GGCGGATGAG
ATCACGTTGG TGGTCGTGCA CAACGGTGGG GTGAAGGGCA AGGCGTTGCT GACCGCGGTG
GAGAAGGCCG GGGCGGCGCG GGTGGATGTC GCGAAGGTGA CCAAGCCGAC GGAGCGGATC
GCCTTTCTGC GTGATGAGTT CAAGGCGGCC AAGCGGCAGA TCACCGAGGA GGCGGCGCGT
GCGCTGCTCG ATGCGGTGGG CAATGAGTTG CGGGAGTTGG CAGCGGCTGC GGCGCAGCTG
ATCGCCGACA CGGCTGAGGA CGGCAAGGCG CCGATCGACG AGACGGTGGT CGCCAAGTAC
TACAGCGGGC GTGCGGAGGT GTCCGGGTTC ACCGTGGCGG ATCTGGCTGT GGACGGGCGG
ACCGCGCAGG CGCTGGAGCA GCTGCGTTGG GCGCTTGCGA CCGGGACTGC TCCGGTGCTG
ATCACCAGTG CGTTGGCGGC CGGGGTGCGG TCTGTGGCGC GGGTGGCGTC GGCGCCGCGT
GGCGCGCGTC CGGCGGATCT GGCGCGCGAT TTGGGGATGC CGCCGTGGAA GATCGACAAG
GTGCGGCAGC AGGTGCGCGG GTGGACGCCT GACGGGATCG GGACCGCGTT GCTGGCGGTG
GCTGAGGCCG ATGCCGCGGT GAAGGGTGGC GGCGACGATC CGGCGTACGC GTTGGAGCGG
TGTGTCGTGA CGGTGTGTCA GGCCCGGGGG CAGGGCGCTC GCGGCTGA
 
Protein sequence
MLGLMPAHVA SPPQLVLVVG AEELLVDRAV ARVVAARRAA DPETEARDLM PGSFSAGTFA 
ELVSPSLFGE SRVVVVRSAQ DLAAEDVTML TSALGELADE ITLVVVHNGG VKGKALLTAV
EKAGAARVDV AKVTKPTERI AFLRDEFKAA KRQITEEAAR ALLDAVGNEL RELAAAAAQL
IADTAEDGKA PIDETVVAKY YSGRAEVSGF TVADLAVDGR TAQALEQLRW ALATGTAPVL
ITSALAAGVR SVARVASAPR GARPADLARD LGMPPWKIDK VRQQVRGWTP DGIGTALLAV
AEADAAVKGG GDDPAYALER CVVTVCQARG QGARG