| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7068 |
|---|
| Symbol | |
|---|
| ID | 8338435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 8211873 |
|---|
| End bp | 8214896 |
|---|
| Gene Length | 3024 bp |
|---|
| Protein Length | 1007 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644960149 |
|---|
| Product | Endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_003117739 |
|---|
| Protein GI | 256396175 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3568] Metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.332521 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.746742 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTACGA GCCAGGAGAT CTACCACCGC GTGCGGTGGG ACGCGCGCTT CGACGCGTCG
CGGTTCGTGC TCGGCGTGGA AATGCGCGGG CGGGAGCCGA AGCGGGTGCC GCTGCCCTCG
TTCGATCCGC ACGGCGACAT TCCTTGGCAC CGGGTGCTGT TCTTCGAGGC CGACGGTCGG
CTGGTGTGGG ACCGGGCTTC CGGGCTGGAC GCCCTGGACG CCCTGGACGC CTCGGGGGCG
GGTCTGGCGC AGCGCGTCCG GTTGCTGGCC GCCCCGTTCT TCGAGCCGCG TACGCCGCAC
GCTTTCATCG ACGGGCGCTG GCAGCCAGGG ACCAACGCCT CCTCTCCTGC CATCGGGTTG
GACCTGCGAA TACTCACGTG GAACACCCTG TGGGACCGCT ACGACAAGGA CCTGATTCGC
ACCGCCGAAC GCCGCCCGAT GCTGCTCGCG GCACTGCGCG CTGCGGACGT TGATGTGATC
GCACTGCAGG AGGCTGAGCC CGCGCTGGTG AAGATGCTGC TGGCCGAGGA TTGGGTGCGG
CGCGAGTGGA CGCTCGGGGG CGATCCGCGC TCGTCGGACG TCGCGGACAG CGGGGTGCTG
GTGCTCAGCC GGCTGCCGGT GGTCGAGGCC GGGTGGCATG CGCTGGGTCG GTACAAGGCG
GTCGCGGCGG TGGTCGTGGA GGGCGGCGCC GGTCCGGTCG TCGTCGCGAA CACCCACCTG
AGCAGCGACC ACTCAGCCGA CGGCGCCAGC CTGCGCACCG AGCAGCTCGG GCAACTAGCC
GACGGCCTGC GAGCCATCGA CGCGGTCCCC GTGGTTCTGG TCGGCGACTT CAACGACGAC
ACCGACGCCC CCGCCTCCCG CCTCGGCATG ACGGACGCGT GGACGCAGGT CCACGGCGTA
GCGGACGACA CCGCGACCTT CGATCCGTCG GCGAACCCCC TGGCAGCGGT GTCTTCGCTG
ACAGGCGACG CCAAGCGTCT GGACCGCGTG CTGCTGCTAG GCGCCACCGC TTCGGACGTA
CGCCTGATCG GCGAGGTTCC GAACGCCGAC GGCCTGTTCG TGTCGGACCA CTACGGAATC
ACCGCACTGG TAACGGCGAC CGCCTCAGCC ACGCCAACCT CCCCTATCGC AAGCGCCACC
GCCTCCCCCG CACTCGACGC GACACCAACC GCCCGAACCG CCCTCGCCTG GATCCCGCCA
ACCCCGGCAT GGGAGCCGAT CCAGGAGATC CGCCGCCGCC TCGACCCGCA GGTCCACCGC
TGGCCGCCGC ACGTCAACCT CCTGTTCGGC TTCATCCCCG AGTCAGAGTT CGACGCCGCG
ATCCCCCTGC TGAGCAAGGC CGCCGCCACC GTCGCACCCT TCGAGACAGA ACTCACCGAA
GTCCGCCACT TCACCCACCG CACCGACAGC ACCCTCTGGC TCCACCCCAC CGGCACCGCA
TGGCAAACCC TGCACACAGC CCTCCTCGAA GCCTTCCCCA CCTGCCGCAA CCGCGAGACC
TACACCCCGC ACCTGACCAT CGCCAAGGTC CCCAACCCAC CCCGCACCCC ACCCAAGATC
GCCCCCACCA CCACGCCAGT CACCGAACTG GCCCTCCTCT CCCGCCGCGC CGACGGCCCG
ATGGAAGTCC GCGCAGTCAT CGAGCTGGGA ACCGGCGCAG TCCGGCTGCT GGATGTTGAC
CCCGGCGCCA CTTCCGCCAC CCCGCAGCCC GCCGCGCCCG GATCATCTGG CGCTGGCACT
GGCACTGGCG CCGCCATCTC GCCGAACGCC CCTGCCGCCT CGGATCCCCC GCACCTCGAC
CACCCAGCCG CCACCAGCCA CCGCGCGCTG AGCACCGGCG CAGTCCGGTC GATGGCTGCT
GATGCCGGTG CGGCCTCCGA CTCCGCGCAC CTCGACCGCC CCGCTGCCAC CGGCCACCGC
GCGCTGAGCA CCGGCGCAGC CCGGTCGATG GCTGCTGATG CCGATGCGGC CTCCGACTCC
GCGCACCTCG ACCGCCCCGC TGCCACCCTC ACCGCGCGCA TCACCGAAGC CCTCCCCGAG
GCCACCATCC ACCTCGTCGG CTCCCGCCGT ACCGCCACAC ACCTCCCGGC CGCCGACATC
GATCTCGTCG CGGCCGTCCC GGGCGCCCCC GACATCGGCG CGCTCGAGCG CCGCGTCGCC
AAGGCGCTCG GCGCGGGTCA TCGCGTGCGC CAGCTCGTCG CCGCGCGCGT GCCGGGTCTG
CGCATCGTCA CCCCTCGCCT CAGTGCCGAC CTCGTACTCG CCCCTACCGG CGACATTCCG
CCCGCCGATG CCGTCGCGCG GCGTGCCGAA CTCGGCGAGA CCATCGCCAG CTCGCTGTCT
GCGGTGTCCG ACGCCGAGGC GCTCATTGCC CTGCGGCCGG GACCGCATGT CCGCGTCGCC
AAAGCCTGGG CGCGTGCGCG CGGCCTCGAC GCCGCCCCGC TCGGCGGGCT CCCCGGGCTC
GCGTGGGCGC TGATGGCGGC GCGCTGCCGC GACCTGACCG ACTTCTTCGA GACCTGGGCC
GCCCACAGTT GGCAGGACCC GATTCCCACC CCCACCGCGC CGATCCGCGA CCTGACGCTG
CATCTCACCG CATCGATGCG CGACCTGATC ACCGAAGAGC TCTACAACGG CTGGGAGACG
GTCACCTCGA CACCCGACCC GCTCCCGACG CTCCTCGCGC CGCCCCCGAT GCACCGCCGC
CACCGCCGCT GGGCCGTGAT CACCCTCAGG GCAGACGGCA TCGAAGCACG CGACGTCCTC
GAAGGCCGCG TCCGAGGCCG CACCCGCAGC CTCCTGTCAG CCCTCGACGA AGCCGGCGTC
ACCGACACCC ACGCGTGGCC TCGCGCCTTC CACACCGCCG ACGCCAACGC CAACGCCAAC
ACCGAGCTCC GCACCGCCAT CGGCCTCGGC CGCACCCCGC CGACCCGCGA CGCGCTCGCC
GAGATCACCA AGCCATGGCT CCGCGGCCTG AGCGGCGTCA CGGTCGAGCT GGCTGGGAAC
GGCGACGTGC CGACGCTGAT CTAG
|
|---|
| Protein sequence | MRTSQEIYHR VRWDARFDAS RFVLGVEMRG REPKRVPLPS FDPHGDIPWH RVLFFEADGR
LVWDRASGLD ALDALDASGA GLAQRVRLLA APFFEPRTPH AFIDGRWQPG TNASSPAIGL
DLRILTWNTL WDRYDKDLIR TAERRPMLLA ALRAADVDVI ALQEAEPALV KMLLAEDWVR
REWTLGGDPR SSDVADSGVL VLSRLPVVEA GWHALGRYKA VAAVVVEGGA GPVVVANTHL
SSDHSADGAS LRTEQLGQLA DGLRAIDAVP VVLVGDFNDD TDAPASRLGM TDAWTQVHGV
ADDTATFDPS ANPLAAVSSL TGDAKRLDRV LLLGATASDV RLIGEVPNAD GLFVSDHYGI
TALVTATASA TPTSPIASAT ASPALDATPT ARTALAWIPP TPAWEPIQEI RRRLDPQVHR
WPPHVNLLFG FIPESEFDAA IPLLSKAAAT VAPFETELTE VRHFTHRTDS TLWLHPTGTA
WQTLHTALLE AFPTCRNRET YTPHLTIAKV PNPPRTPPKI APTTTPVTEL ALLSRRADGP
MEVRAVIELG TGAVRLLDVD PGATSATPQP AAPGSSGAGT GTGAAISPNA PAASDPPHLD
HPAATSHRAL STGAVRSMAA DAGAASDSAH LDRPAATGHR ALSTGAARSM AADADAASDS
AHLDRPAATL TARITEALPE ATIHLVGSRR TATHLPAADI DLVAAVPGAP DIGALERRVA
KALGAGHRVR QLVAARVPGL RIVTPRLSAD LVLAPTGDIP PADAVARRAE LGETIASSLS
AVSDAEALIA LRPGPHVRVA KAWARARGLD AAPLGGLPGL AWALMAARCR DLTDFFETWA
AHSWQDPIPT PTAPIRDLTL HLTASMRDLI TEELYNGWET VTSTPDPLPT LLAPPPMHRR
HRRWAVITLR ADGIEARDVL EGRVRGRTRS LLSALDEAGV TDTHAWPRAF HTADANANAN
TELRTAIGLG RTPPTRDALA EITKPWLRGL SGVTVELAGN GDVPTLI
|
|---|
| |