| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7065 |
|---|
| Symbol | |
|---|
| ID | 8338432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 8208096 |
|---|
| End bp | 8209397 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644960146 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003117736 |
|---|
| Protein GI | 256396172 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.142517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGTTTGC TGCCGCATGA CCGGGTCCAA AGGACCATGG CCGTCGCCAC GTTCGTGAAC
ACGATCGGCA ACGGCATGTA CATGACCGTC ATGGTCATGT ACTTCACGCG ATCGGTCGGT
CTGCCGGCCT CGCAGGTGGG GCTCGGCCTC ACCATCGCCG GGCTGTTCGG GCTGGCCGCG
GGGGTTCCCG TCGGGCACTT GGCGGACCGG CGCGGACCGC GCGAGGTGAG CGTGGTGCTC
GGGATGCTGG CCGGTGCGGT GATGGTGGCC TTCACCATGG TCCACACCTT CTGGCAGTTT
CTCGCCGTGG CAGTCGTTGA GAACCTGGTC GCCTCCAGCA ACCGGGCCGC GCGCGGGGCG
ATGATCGCGC GCTTCGGGGG CGAGGAGAAG GCGGTGTTCC GCGCGTATCT GCGCTCGGTC
ACCAACGTCG GGATCGCTTT GGGCGGCGTG GCCGGGGGGC TCGGCCTGGT CTTCGACACG
CGCGCCTGGT ACGTCGGGCT GATCGGATTC AATGCCCTGA CGTTCGTGGT GTCCTCGGTC
ATCGCCTTGC GCGTGCCGCG GATGGAGCCG CTGCCGGTCC CGCATGGAGC TAACAAGTGG
ATCGCGTTGG GGGACCGGCG GTTCCTCACC TCCGCGGCGC TGATCGGCGT GATGAGCATG
CAGTTCGAGG TGTTGCTGTT CGCCGCGCCG CTGTGGATCG CCAAGCTGGG GCACGCTCCG
CGCTGGACCG TCGGCGCGGT GTTGGTGATC AACACGGTTC TGGTGGCGAC GCTGCAGGTG
CGCATGAGCC GCGGCGTGGA CACGGTCGCC AAGGGCGTGC GGGCGACGGT GCGGTCCGGA
TGGATCTTCG CCGGGGCGGC GGTGTTGTTC GGCTCGATCG GCTGGGTACC GGCGTGGGCG
GCGGTGGTGC TCCTTCTGGT CGCGGCCGCG GTGCACTCCA TCGGCGAGAT CGTGCAGCAG
GCCGGGGTGT TCGAGCTCGG GTACGAGCTC GCCGCCGAGC ACGCGCAGGG GCAGTACCAA
GGGCTGCTCA GCATGGTGAC CGGCGCTGCC ATGTCGCTGG CGCCGGGCTT CTATGCGCTG
GCGTGCGTCG ACTGGGCACC CGCCGGATGG TTCGTGGTCG GGGCGGTCTT CGCGGTCGCC
GGGTGTGCGA TGCCGTTGGC CGTACGGATC CGACCGCCGG CGTTCTTGGC GGCGACCGAG
GCGGCAGCGG CAGCGGCGGT GGCGGCGACA GTGGCGGCGG CGACACTACC GACGGCGGCA
CCAGCGGCGC CGATAGCCGT CGCGGAGGTA CCGGCGGTCT GA
|
|---|
| Protein sequence | MSLLPHDRVQ RTMAVATFVN TIGNGMYMTV MVMYFTRSVG LPASQVGLGL TIAGLFGLAA
GVPVGHLADR RGPREVSVVL GMLAGAVMVA FTMVHTFWQF LAVAVVENLV ASSNRAARGA
MIARFGGEEK AVFRAYLRSV TNVGIALGGV AGGLGLVFDT RAWYVGLIGF NALTFVVSSV
IALRVPRMEP LPVPHGANKW IALGDRRFLT SAALIGVMSM QFEVLLFAAP LWIAKLGHAP
RWTVGAVLVI NTVLVATLQV RMSRGVDTVA KGVRATVRSG WIFAGAAVLF GSIGWVPAWA
AVVLLLVAAA VHSIGEIVQQ AGVFELGYEL AAEHAQGQYQ GLLSMVTGAA MSLAPGFYAL
ACVDWAPAGW FVVGAVFAVA GCAMPLAVRI RPPAFLAATE AAAAAAVAAT VAAATLPTAA
PAAPIAVAEV PAV
|
|---|
| |