| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6990 |
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| Symbol | |
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| ID | 8338356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 8089302 |
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| End bp | 8090321 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644960070 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003117661 |
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| Protein GI | 256396097 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.458104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGACG AGACTGTTCC ACAGATGACC GCGCTGTCTG CCGTCGATCA GTACGTGATC
GACATCTACT GCCACGCGGT ACGCCACGGC ATGATCGAGT GCCTGGACGA AACAGCACGC
GAACTGGGTC TGGACCGCGA CCTGGTGGTG TCCGCGATCA ATCAGCTGAT GGACACCGGG
CTGATCATCC GGGACACCTG CAACCCCAGT CTGTACCTGC CCATCGGCCC TGACGTGGCC
ACCGCGCTCC TGACTTATCC GATGGAGCGC GAGATCTATC AGCGCCGCGA GTTCATCGCG
CGCATCAAGG GCAGTTTCGG CACGCTGGCA CAGTCCGGCG CGCTGAACGG AAACCAGGTA
CCGGCCACAG CCGCGGCCAT CGAACGGATC GATGGCGGCG CGGTGCTTAA GGGATTCCTG
AAGGAATCCG GAGATGCCTG CGAAAAGGAG ATCATCGTTC TCCAGCCGTA CATTGAAGAC
GAGAACGAAT TCGATGATTT ACTCCAGTGT TTTCACGTCC CGGTGGACCG CGGTATCCGG
CTGCGGATCG TCCTGCCGCA CCGATGTCGC TCGCACCTGC GCTCGCGGGC GGCGATGAAG
CGGCTGATCG AGGCCGGCGC CGAGGTCCGC ACGGTGAGCC GGGTGCCGCA GTCGCTGATG
GTCTTCGACA ACGAGCTGTC GGTCCTGGGC TGCGGCGCCG CCGACGACTG CGTGGTCACG
CGGGTGCGTG CCCAGGACGT CGTCAAGTTC CTGATAGACC ACTTCCTGCA CCTGTGGGAC
ACCGCCAATC CCGTGGACGT CGCGGAGTTC GGCTACGCCG AGGCCGCCGA CAGCCTGCAG
CAGGACATCG CCAAGCTGAT GGCGCAGGGA TACACCGATG AGGCGGTCGC CCGGCGGCTC
GGAATGTCGG TCCGCACGTG CCGCCGGCAC ATCGCGGCCC TGATGGGAAG CCTGGACGCG
GTCAGCCGGT TCCAAGCCGG CGTGCGCGCG GCCAGTTCCG ATCTGATCGA ACTCACCTGA
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| Protein sequence | MRDETVPQMT ALSAVDQYVI DIYCHAVRHG MIECLDETAR ELGLDRDLVV SAINQLMDTG
LIIRDTCNPS LYLPIGPDVA TALLTYPMER EIYQRREFIA RIKGSFGTLA QSGALNGNQV
PATAAAIERI DGGAVLKGFL KESGDACEKE IIVLQPYIED ENEFDDLLQC FHVPVDRGIR
LRIVLPHRCR SHLRSRAAMK RLIEAGAEVR TVSRVPQSLM VFDNELSVLG CGAADDCVVT
RVRAQDVVKF LIDHFLHLWD TANPVDVAEF GYAEAADSLQ QDIAKLMAQG YTDEAVARRL
GMSVRTCRRH IAALMGSLDA VSRFQAGVRA ASSDLIELT
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