Gene Caci_6955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6955 
Symbol 
ID8338321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8035668 
End bp8036357 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content71% 
IMG OID644960036 
Productputative radical activating enzyme 
Protein accessionYP_003117627 
Protein GI256396063 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGGC CGCTCGTGAA CGACGCGCGT CTGCGGATCA GCCGCAGCCA TTTCCCGGTC 
ACCGCCCTCG GCCCTGGCTT GCGGCTCGGT GTCTGGGGGC AGGGATGCCC GCTGGCGTGC
AGCGGGTGCA TGCCCCGAGG CACGCGGGAT CCCGACGGCG GCGTCGAGGT GGGCGCCGCC
GACCTGGAGC GCCGCTGGCG CGACACCATG GACCGCGGCG CGACTGGTCT GACGGTGAGC
GGTGGCGAGC TGCTGGCCCA GGCTGGGGCG TTTCGCAGGT TCCTGAAGAG CGTGCGCCGG
GTGGGTTCCG AGTTCGGCGG GGATCTCGAC GTCCTGATCT CCACCGGATA CAAACTCGGA
GAAATCGATG CGGACCGGGT GGAAGCGGTG GATCTCGCCG ACGCGGTGAT CATGGGCTGC
TATGACGCTG CCAGTCCTAC CGACCCGCTC TGGCGGGGAT CGGCGAACCA ATCGCTGCTG
ATCCGCAGCG ACTCGGGACG GCGGCGCTAT GCGGAGTGGG AGGACCGGCG GGCAGCCCGG
CCTCCCTGGC AGATGCGGGT GGACGGGACG GGCGTCTGGT TCGCGGGTAT TCCGCCGCGC
GGAGCGCTCG CCCGTGTGGA CCGCGCTGTG CGGTCGACAG GTTTGGCGTT CCGGAGCGTC
AGTTGGCGCT CAGGCAGCTC TGGGCTTTGA
 
Protein sequence
MGRPLVNDAR LRISRSHFPV TALGPGLRLG VWGQGCPLAC SGCMPRGTRD PDGGVEVGAA 
DLERRWRDTM DRGATGLTVS GGELLAQAGA FRRFLKSVRR VGSEFGGDLD VLISTGYKLG
EIDADRVEAV DLADAVIMGC YDAASPTDPL WRGSANQSLL IRSDSGRRRY AEWEDRRAAR
PPWQMRVDGT GVWFAGIPPR GALARVDRAV RSTGLAFRSV SWRSGSSGL