Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6931 |
Symbol | |
ID | 8338297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8003988 |
End bp | 8004551 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644960014 |
Product | protein of unknown function DUF955 |
Protein accession | YP_003117605 |
Protein GI | 256396041 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2856] Predicted Zn peptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0103363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00209082 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCGAAGAG GTTTCAAAAC CGAGGCCGAG CGCCTGGCCG AACGGCAGCG CGCACAGCTT GGCCTCCAGC CCGTCGATCC CCTGAAGATC TTCGATCTTG CTGAGAACCT CGGAGTCCGG GTGTACAGCG CCAGCGACCT AGTGGATCGC TCAGCCCTGG AAGAACTTGA ACGACTCCAA CCAGGAGCAT TCTCCGCAGC CACCTTCAAC ATGCCCGACG GCGACACCGT CGCCGTATAC AACCCCCTCA GCGAGCCGGG ACGCACCAAC AGCGACATCG CTCACGAACT CGCCCACATC CTCCTCGGCC ACCGACTGCG CGACCTCCAA AAAATCGGAG GAAACACCTT CTTCGCATGC GATCCCGAGC AGGAGGAGGA AGCGAACTGG CTTGCCGGCT GTCTGCTCCT ACCTCGGCCA CTATTACTTC GCGAGGCTTA CGCCAAGGCA ACCCCAGAAG CCATTGCCCA CAAGTATCAC GTAAGCATTT CAATGGCTCG CTTCAGGCTC AATGCCAGCG GCGTCATGAT GCAAGCACGC AGATCCCCGC AAAGGCGCCC ATAG
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Protein sequence | MRRGFKTEAE RLAERQRAQL GLQPVDPLKI FDLAENLGVR VYSASDLVDR SALEELERLQ PGAFSAATFN MPDGDTVAVY NPLSEPGRTN SDIAHELAHI LLGHRLRDLQ KIGGNTFFAC DPEQEEEANW LAGCLLLPRP LLLREAYAKA TPEAIAHKYH VSISMARFRL NASGVMMQAR RSPQRRP
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