Gene Caci_6931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6931 
Symbol 
ID8338297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8003988 
End bp8004551 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content60% 
IMG OID644960014 
Productprotein of unknown function DUF955 
Protein accessionYP_003117605 
Protein GI256396041 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2856] Predicted Zn peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0103363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00209082 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCGAAGAG GTTTCAAAAC CGAGGCCGAG CGCCTGGCCG AACGGCAGCG CGCACAGCTT 
GGCCTCCAGC CCGTCGATCC CCTGAAGATC TTCGATCTTG CTGAGAACCT CGGAGTCCGG
GTGTACAGCG CCAGCGACCT AGTGGATCGC TCAGCCCTGG AAGAACTTGA ACGACTCCAA
CCAGGAGCAT TCTCCGCAGC CACCTTCAAC ATGCCCGACG GCGACACCGT CGCCGTATAC
AACCCCCTCA GCGAGCCGGG ACGCACCAAC AGCGACATCG CTCACGAACT CGCCCACATC
CTCCTCGGCC ACCGACTGCG CGACCTCCAA AAAATCGGAG GAAACACCTT CTTCGCATGC
GATCCCGAGC AGGAGGAGGA AGCGAACTGG CTTGCCGGCT GTCTGCTCCT ACCTCGGCCA
CTATTACTTC GCGAGGCTTA CGCCAAGGCA ACCCCAGAAG CCATTGCCCA CAAGTATCAC
GTAAGCATTT CAATGGCTCG CTTCAGGCTC AATGCCAGCG GCGTCATGAT GCAAGCACGC
AGATCCCCGC AAAGGCGCCC ATAG
 
Protein sequence
MRRGFKTEAE RLAERQRAQL GLQPVDPLKI FDLAENLGVR VYSASDLVDR SALEELERLQ 
PGAFSAATFN MPDGDTVAVY NPLSEPGRTN SDIAHELAHI LLGHRLRDLQ KIGGNTFFAC
DPEQEEEANW LAGCLLLPRP LLLREAYAKA TPEAIAHKYH VSISMARFRL NASGVMMQAR
RSPQRRP