| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6894 |
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| Symbol | |
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| ID | 8338260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7962939 |
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| End bp | 7964309 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644959982 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003117573 |
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| Protein GI | 256396009 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0376392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.261067 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCG ATGCTGTCTC GGTGCCGTAT CTTCCGGCAC AGCCGCTTGC GAAGGGTCCA
GGACTACTGA CGCCAGAAAC CCTGGTCAAG GCGGTCACGG CCAGGATGAC GGCCCAGATT
CGCGTGGAAG AGTCAGCCAC TGGTCGGGTG GTGGACGCCG AGCGGCGGGA CCAGATCGCC
GAAGTGATTC TCGCCGAGGA GCTGGAGGCG ATCGCGCACG CCGAGCTCTC CGCCGGTCGG
CCGATGCCGA CCGCCGAGGC TGAGGCCGAT TTGGCTCGAC GTGCTCGCAA CCACCTGTTC
GGGCTCGGAG GATTTCAGCC GTACCTGGAG CTGGACGATG TCGAGAACAT CAACATCCTG
GGTCATGACA AGGTGTTCCT GCGGCTGACT GGAAACCGGC GGGTCCGTGG CGAGTGGCCG
GTCGCGGCAA GCGATGACGA GTTGGTCGAC CTGATCCGGA TGGTCGCCGC TCGGTCGGGC
GAGGACGAGC GACGGTTCGA CCGCGGCTCG CCAATCGTGG ACGCCCAGTT GCCGGACGGC
TCACGCATGA ACGCGGTCGC CTGGGTGTCT CGGCGGCCGA CCGTAAGTAT CCGAATCCAC
CGGTATCCCA CGGCCACCAT GACCACGATG CTCGACCTCG GAGTCGTCGA CGAAGACCTC
GCCGCGTTTT TGTCCGCGGC GGTGAAGGCC CGTATGAACA TCCTCATCGC AGGCGGACCA
GGAACCGGTA AGACCACGCT TTTGCGCGCG CTGGCGTCAC AGATCAGCCC TGCCGAATCG
CTGATCACGA TTGAGGACAG CCGCGAGTTG AACCTCGACG CTGACGCCCA AGCCCACCCC
GAGGTGCGCT CGCTCCAATC GCGCCCCGGC AACATCGAGG GCGAGGGCGA GATCAGTCTG
GCGGTGCTGA CACGCGCCGC GCTGCGCCAG GCTCCCGACC GTGTGATCGT CGGGGAGGTC
CGGGGCGAAG AAGTAGTGCA GATGTTCAAG GCGATGTCCC AGGGCTCGGA TGGGTCGATG
GCAACGATCC ATGCCTCCGA TTCGCGCGAG GTATTCGTGA AGCTGGCGAC CTACGCCGCC
GAGGCACCGT CCAGGCCCGG GGTGACGGAG GTCAACCTGT ATATCGCCTC CGCGGTGGAC
TTGATCGTGC AGCTGGACTA CACGACCGAC GGCATCACCC GCGTCATTTC CTCCGTCCGG
GAGGTCAGCG ATGCCGACGG GGAGAACCTG GTCACGAACG AAGTGTTCGA GCCCGATGGT
GACAACCGGG CTCGCGCGAC GGGTGTCATC TCGGATAAGC GTGCAAGAAA GCTCGCAGCG
GCGGGGCTCG ACCCGGATGT TCTCAGAGCA GCCCTCCCGA GGGAGTGGTG A
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| Protein sequence | MTVDAVSVPY LPAQPLAKGP GLLTPETLVK AVTARMTAQI RVEESATGRV VDAERRDQIA
EVILAEELEA IAHAELSAGR PMPTAEAEAD LARRARNHLF GLGGFQPYLE LDDVENINIL
GHDKVFLRLT GNRRVRGEWP VAASDDELVD LIRMVAARSG EDERRFDRGS PIVDAQLPDG
SRMNAVAWVS RRPTVSIRIH RYPTATMTTM LDLGVVDEDL AAFLSAAVKA RMNILIAGGP
GTGKTTLLRA LASQISPAES LITIEDSREL NLDADAQAHP EVRSLQSRPG NIEGEGEISL
AVLTRAALRQ APDRVIVGEV RGEEVVQMFK AMSQGSDGSM ATIHASDSRE VFVKLATYAA
EAPSRPGVTE VNLYIASAVD LIVQLDYTTD GITRVISSVR EVSDADGENL VTNEVFEPDG
DNRARATGVI SDKRARKLAA AGLDPDVLRA ALPREW
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