Gene Caci_6889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6889 
Symbol 
ID8338255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7960033 
End bp7960494 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content69% 
IMG OID644959977 
ProductTadE family protein 
Protein accessionYP_003117568 
Protein GI256396004 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0951523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.715699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGACG CGGCAGCATC GCGTCGATAC CGGCGGTGCG GTGAAGCCGA CAGCGGCTTT 
GCCACGCTGG AGACCGTCAT TGTCACGCCG ATCCTGGTGT TGGTCCTGTT GGTGGCTGTT
GCCGCGGGAC GTCTGGAATC CGCACGGCTC GACGTCGATA CAGCCGCCGG CGCCGCTGCC
CGTGCCGCAT CGCTCACTCG CGGTCCGGCC GGAGCTGCCG CGGCGGCCAA GGCCGAGGCT
GCTCGGTCGC TCGCTTCCGC CGGGGTGTCG TGCCCGCAAC CGAAGGTCGT GGTCGACACC
GCTGTTTTCC GGCCTGGCGG CGTGGTCAAG GTGACAGTGA CCTGTCGGGC CGACCTGGGC
GACTTGGCCA GTGTGGGCCT ACTTCCGCTC CGCACCAGCA TCACGAAGTC GTCGACGTCT
CCGATCGACC AGTACCGCCA AGCAACGGCT GGAGGCTCCT GA
 
Protein sequence
MADAAASRRY RRCGEADSGF ATLETVIVTP ILVLVLLVAV AAGRLESARL DVDTAAGAAA 
RAASLTRGPA GAAAAAKAEA ARSLASAGVS CPQPKVVVDT AVFRPGGVVK VTVTCRADLG
DLASVGLLPL RTSITKSSTS PIDQYRQATA GGS