Gene Caci_6883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6883 
Symbol 
ID8338249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7952942 
End bp7954231 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content65% 
IMG OID644959971 
Productputative transcriptional regulator 
Protein accessionYP_003117562 
Protein GI256395998 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0592787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATG AGCTCCGAGA CGACATGCGA ACGGCCCGAC GCGGCTCTGG ACTGACGTTC 
GCCGTGTTCG CGCGGCAGGC GGGATACGCC GAGAGCTACC TACGCAACGT GGAGAACGGG
ACCAAACCCC TCACCAGCGA CGTCGCCAAA GCCTACGATC GTGTGCTGGC GACCGGCGGC
GAATTCAGCA TTGCGGTCGA CGGTCCGAGC CGACAAAAGG CACCATGGAA CCGTCAGGAG
ACATTCACCA TCCTGGTGGA CATGGCAACA GGAGGCGGCG TGGACCGTCG GAGCTTCGTC
ACGACTACAG GTGCAGCACT GACCTCGCTG GTCGGTCATT GGTCAAGCAT TCTCACCGGA
CAAGCCACAC CGGCCGCGCT AAGCGACACT CCAGCAGATG CCGCCCCTAG GTTGTTCGGC
CACATCGAGG AACGTCTCGA ACACTTGAGA CACCTCGATG ACGAGTTCGA CAGCGGTGAA
ATGGCGCGCA TGGCACGCAA CGAACTGGCT CTGCTGACGC GGCTTCTCAA GGCCGGTGGT
TTGGACGAGA CCACCGAGAA CCGCGCCTAT TCGCTCGCCG CAGAAGCCTC GCGACAGGTG
GCATGGAACC TTTTCGACAG CAAGCAGCAC GCCGCAGCCG AGCGGTACTA CGAGACGGCC
CTACGCGCCT CCGCTGAGGC CACGGATGTG CTGACCGGTG CCTACGCGAT GTCCTTCATG
GCCATCCAGC ACTACACCGC CGGCGATCCG AACGACGCTG TGAAGCTCTT GGACAACGCC
GAGCAGACCG CCGGCAGCAG GGCCACGCCG CGCATGCGCG CGATGCTTGC CGCACGCAAA
GCCAGAGCTC TTTCGAAAAC CGGCGACCGA CGAGGATGTG CGCGAGCCCT CACGGCTGCC
AGAGACCTGC TCGACCTCGG CCCTTCAGAA GACGATCCCG ACTACCTGTA CTGGGTCACG
CAGGGCGAAA TCGAGATGAT CGCTGGTTCC TCAGCCCTGG AGCTGAACGA TCCCGCCCGC
GCAGTGCGCT GCTTCGACGC CGCGGTCAGG GCCGACTATC CCGGCGACGT GCAGTATCCC
AAGAGCCATG CCATCTACCT CGCTCGCGCT GCCGAGGCAC ACCTGGCCTT GCACGACTTG
GACGCTGCGG TGGTCCAAGC CCGCCACGCC GGCAGGTGCC TGGGCTCGGT GGACTCAGCA
CGGTCGTCCT CAACGCTGGC CGGGCTGCGC CGTCAGCTGA GCGAGCATCG TGGACATCCC
GCCGTGCGGG CATTCCTACA GGAGGCCTAG
 
Protein sequence
MADELRDDMR TARRGSGLTF AVFARQAGYA ESYLRNVENG TKPLTSDVAK AYDRVLATGG 
EFSIAVDGPS RQKAPWNRQE TFTILVDMAT GGGVDRRSFV TTTGAALTSL VGHWSSILTG
QATPAALSDT PADAAPRLFG HIEERLEHLR HLDDEFDSGE MARMARNELA LLTRLLKAGG
LDETTENRAY SLAAEASRQV AWNLFDSKQH AAAERYYETA LRASAEATDV LTGAYAMSFM
AIQHYTAGDP NDAVKLLDNA EQTAGSRATP RMRAMLAARK ARALSKTGDR RGCARALTAA
RDLLDLGPSE DDPDYLYWVT QGEIEMIAGS SALELNDPAR AVRCFDAAVR ADYPGDVQYP
KSHAIYLARA AEAHLALHDL DAAVVQARHA GRCLGSVDSA RSSSTLAGLR RQLSEHRGHP
AVRAFLQEA