Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6874 |
Symbol | |
ID | 8338240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7941912 |
End bp | 7943237 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644959963 |
Product | Alpha-galactosidase |
Protein accession | YP_003117554 |
Protein GI | 256395990 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.817325 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGATCCC GATGGATGAC GCTGGCGGTA GCCGCCGTCA GCGCCGGGGT GGTGGCGTCG CTGACGCTGG TGCCCACGGC CCAGGCGGAG GACAACGGGC TGGCCAAGAC CCCGCTGATG GGCTGGAGCG GCTGGGGGTT CCTGCAGCGG GACCCCTCCG CGGCGAAGTT CAAGGCGCAG GTCGACGCCC TGGTGTCGAG CGGCCTGAAG GCCGACGGCT ACGTGTACGC CAACATGGAC GACTTCTGGT ACAAGTGCCC GGGAAGCCAG GGCCCTGACG TCGATGCGAA CGGCCGCTGG GTGACCGACA CCACGCACTT CCCCGGCAGC GGCGGCAAGG ACGGCATGCA GGTCCTGGCG GACTATGTGC ACAGCAAGGG GCTGAAGTTC GGCCTCTACG TGACCCCCGG CATCTCCGCC CAGGCCGTGG CGAAGAAGAC AAAGATCCTG GGCAGCTCGC ACACCGCCGA CCAGATCGTC AGCGGCAGCT CGGCCAGCAA CTTCAACTGC AAGGGCATGA AGAACATCGA CTTCAGCAAG CCCGGTGCGC AGCAGTTCAT CAACTCCTGG GCGGACGAGT TCGCCTCGTG GGGCGTGGAC TACCTGAAGC TGGACGGCGT CGGTTCGTCC AAGACCGCGG ACGTCAAGGC CTGGTCGTCC GCGCTCAAGC AGACCGGCCG GCCGATCGCG CTGAACCTGT CCGCCAGCCT GTCCGCCAGC AGCACCTGGT CCTCGCTGGC CAACTCCTGG CGCATCGACG GCGACATCGG CGCCAGCCCC CGGGGTTCCA GCTTCCCGCT GACCAGTTGG ACCAACGTCT CCAAGCGGTT CAACGACGCG GCCAAGTACC AGCCCTACGC CGGCAGCGGC GGCTGGAACG ACCTCGACTC CCTGGGCGTC GGCAACGGCG GCAACGACGG GCTCACCTCG CCGGAGCGGC AGACCAATGT GGCGCTGTGG GCGCTGGCCA GCTCGCAGTA CATGCTCGGC GCGGACCTCA CCCACCTGGA CTCCGCCGAC AAGGCCCTGC TGACCAACAA GAAGGTGATC GCGATCGACC AGGACGGCAT CGCCGCCAAG CGGATCAGCG ACAGCGGCAA CGAGCAGGTC TTCGCCAAGA AGGAGAAGAA CGGCACCTGG CAGATCGGGA TCTTCAACAC CGACACCTCC TCCAGCCACA CCTTCAGCCT GCCGCTGTCC AAGCTCGGGA TCTCCGGTTC GGCGAAGCTC ACCGACGTCC TGAGCGGCAA GGACCTCGGC ACCCACAGCA CGTACACCAC CGGCGTCGCG GCCGGCGGAG TCGCCTTCAC CACCGTGACT CCCTGA
|
Protein sequence | MRSRWMTLAV AAVSAGVVAS LTLVPTAQAE DNGLAKTPLM GWSGWGFLQR DPSAAKFKAQ VDALVSSGLK ADGYVYANMD DFWYKCPGSQ GPDVDANGRW VTDTTHFPGS GGKDGMQVLA DYVHSKGLKF GLYVTPGISA QAVAKKTKIL GSSHTADQIV SGSSASNFNC KGMKNIDFSK PGAQQFINSW ADEFASWGVD YLKLDGVGSS KTADVKAWSS ALKQTGRPIA LNLSASLSAS STWSSLANSW RIDGDIGASP RGSSFPLTSW TNVSKRFNDA AKYQPYAGSG GWNDLDSLGV GNGGNDGLTS PERQTNVALW ALASSQYMLG ADLTHLDSAD KALLTNKKVI AIDQDGIAAK RISDSGNEQV FAKKEKNGTW QIGIFNTDTS SSHTFSLPLS KLGISGSAKL TDVLSGKDLG THSTYTTGVA AGGVAFTTVT P
|
| |