| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6872 |
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| Symbol | |
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| ID | 8338238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7939144 |
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| End bp | 7940031 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644959961 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003117552 |
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| Protein GI | 256395988 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCC AGGCGACGCC GGCGACTTCG GCGACGAAGG TTCCCCCTCC CACCGCTCCG
CGAGCGCGCC GCGGCATCAC GCTGCGGCCG GGCGCCTGGC TGGTCTGGGG TGTCCTCGCA
GTCTTCTTCC TCGGCGTGTT CGGCGTCGTG GGCTCCGTGG TCCTTGACTC CTTCGGCCAG
ACCTGGTTCT CCGGGTGGGC GCCGCACGGT TACACCACGT CCTGGTACGG CAAGGCTTGG
AGCGAGTTCA ACCTCGGGCA GGTCATGACC GTCACCATCG AGGTCTCGGT GCTGGTCGTG
GCCATCTCCC TGCTGGTCGG GGTGCCCGCC GCCTATGCGC TGGCCCGCCG TGACTTCCCG
GGCAAACGCG TGGTCTCCAC GATTTTCGTG CTGCCGATCC TGGTGCCGCC GATCGCCTAT
GGCATCCCCT TGGCCACCGT GCTGTACAAG GTCCACCTGG CCGGATCGCT CACCGGCGTG
GTGCTGGCCA ACCTCGTGCC GTCCATCCCG TTCGTGATCT TCACCATGAC CCCGTTCATC
GAGCAGCTCG ACCCCCGGCT GGAAGCCGCG GCCCGGATGT GCGGCGCGTC CACGCGCTCG
GTCTTCCTCC GCGTCCTCGG CCCGCTGCTG CTGCCCGGGA TGCTCGCCGC GGGGATCCTC
GTCCTGGTCC GCACCTTCGG CATGTTCGAG CTGACCTTCC TCACCTCGGG CCCCGACAGC
CAGACGCTGA TCGTGGCCCT GTTCTCGGCG GTGTTCTCCG CCGGCATCCG AAGCCCCCAG
TCCATCGACG CCATGGCCGT CGTCTACACG GCGTCGATGG CGGTGCTGCT GCTGGTCGCC
CTGCGGTTCG TCAACCCCAC GCAACTGGTG GCCCGCAGCT CGAACTGA
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| Protein sequence | MTVQATPATS ATKVPPPTAP RARRGITLRP GAWLVWGVLA VFFLGVFGVV GSVVLDSFGQ
TWFSGWAPHG YTTSWYGKAW SEFNLGQVMT VTIEVSVLVV AISLLVGVPA AYALARRDFP
GKRVVSTIFV LPILVPPIAY GIPLATVLYK VHLAGSLTGV VLANLVPSIP FVIFTMTPFI
EQLDPRLEAA ARMCGASTRS VFLRVLGPLL LPGMLAAGIL VLVRTFGMFE LTFLTSGPDS
QTLIVALFSA VFSAGIRSPQ SIDAMAVVYT ASMAVLLLVA LRFVNPTQLV ARSSN
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