| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6866 |
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| Symbol | |
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| ID | 8338232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7930149 |
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| End bp | 7931630 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644959955 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003117546 |
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| Protein GI | 256395982 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.191188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTGG CGAGGCTGAA GAAGACGATG GCCTCCCGGA TCCTGACGGG CCTGACGGGA
GCGCTTCTCC TGTCCGCGGC GGTCGTGGGA CCGGTTCCGA TCACCCACGC CGCGTCGGCG
AGCACGTTCA GCCCCGGTGC GGCGTGGAAG GACCAGAACG GCAACGCGCT GCAGATGCAC
GGGTTGGGGA TCGTCAAGTC CGGAAGCACC TGGTACGCGT TCGGTGAGGA CAAGAAGGGG
GAGAGTTCCT CGGACACGTC GTTCCGTGCG ATCCCCTGTT ACAGCTCGAC CGATCTGCAG
ACCTGGACGT ATCACAGCAG TGCCCTGTCC AAGCAGGCGA GCGGCGATCT GGGCCCGAAC
CGCATCGTCG AGCGGCCCAA GGTGATCTAC AACGCCTCGA CCCGCCAATA CGTGATGTAC
ATGCACATCG ACAGTCCTTC CTACTCCGAG GCGAAGGTTG GCGTCGCGAC CAGTTCCACG
CCTTGCGGCC CCTACACGTA TCGCGGCAGC TTCCAGCCGC TGGGCTTCCA GAGCAAGGAT
GAGGGCCTTT ACCAGGACAC CGACGGCACT GCCTACCTGA TGTCCAGGGA CCCTCAGCAC
GGCCTGCGCA TCGACCGTCT CTCCGCCGAC TACCTCTCGG TGGCCTCGAA CGTCGCCCTC
TTCCCCGACC TCGAGGCACC GGCGATGATG AAGTCCGGCG GCCGCTACTA CCTGCTCGCC
TCCCACCTGT CGGGGTGGAA GACGAACGAC AACGTGTACG CCGGCGCCAC CTCGCTGAGC
GGGCCGTGGA CGTCGTTCAC CGACTTCGCA CCGGCGGGCA CCTCGACCTA CAACACCCAG
ACCGCGAACA TCATCCCGGT CAGCGGTTCG TCGGGCACCA CGTTCATCTA CGCCGGCGAC
CGCTGGAATT CCTCCGACCT GGGCAACTCG CCGCTCGTCT GGCTGCCGAT CACCGTCTCG
GGCACGACGC TGAATGTCGG ATGGTTCAAT TCCTGGTCGT TGGACGTGTC CGCGGGCACC
TGGACGGCCG GCTCCTCAGT CCCCAGCGCG GCTGCCCACG TCCTCGCCAG CGGTGCCGAC
AACCAGGTCG TCGATGTGGC CAAGGCGTCC AAGAACGACG GCGCCGCGAT CGACCAGTGG
CCCGCCACCG GCGGTGCGAA CCAGAGCTGG AACCTGCACC GCGCCTCCGG CAACGTCTTC
ACCGTCGTCA GCGCTGAGAG CGGCGAGTGC CTGACCGTCT CGGGGGCCTC CACGAGCGCG
GGAGGCGCGC TCATCCAGTG GCCGTGTTCC AGCGCGGCCG ACCAGCTGTG GGCTTTCGAC
GCCGTCGGCG ACTACGCCTC GTCGTCGAAC ACCTCGTACA TCGTCAGAAA CCTCAACAGC
GGCCTCGTCG TCGACATCCC GAAGAACTCC ACCGTCGCGG GCACGGCTTT GGACCAATGG
ACCGGCAACG GCGGGGCGAA CCAGGTTTGG CGCGTCTCCT GA
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| Protein sequence | MTVARLKKTM ASRILTGLTG ALLLSAAVVG PVPITHAASA STFSPGAAWK DQNGNALQMH
GLGIVKSGST WYAFGEDKKG ESSSDTSFRA IPCYSSTDLQ TWTYHSSALS KQASGDLGPN
RIVERPKVIY NASTRQYVMY MHIDSPSYSE AKVGVATSST PCGPYTYRGS FQPLGFQSKD
EGLYQDTDGT AYLMSRDPQH GLRIDRLSAD YLSVASNVAL FPDLEAPAMM KSGGRYYLLA
SHLSGWKTND NVYAGATSLS GPWTSFTDFA PAGTSTYNTQ TANIIPVSGS SGTTFIYAGD
RWNSSDLGNS PLVWLPITVS GTTLNVGWFN SWSLDVSAGT WTAGSSVPSA AAHVLASGAD
NQVVDVAKAS KNDGAAIDQW PATGGANQSW NLHRASGNVF TVVSAESGEC LTVSGASTSA
GGALIQWPCS SAADQLWAFD AVGDYASSSN TSYIVRNLNS GLVVDIPKNS TVAGTALDQW
TGNGGANQVW RVS
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