Gene Caci_6800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6800 
Symbol 
ID8338164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7849235 
End bp7850548 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content68% 
IMG OID644959889 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003117482 
Protein GI256395918 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACG GACCGAACGC GACCGGCAGG CGAAAGCTGG GACGACCGTT CACCCGGCTT 
TGGTCGGCCT ACGCGATCAG CACCCTGGGA ACCTACTTCG CCTTCAACGC CTTCTCACTG
ATCCTGATCC GCATCCTGCA CGCCGGCGCA GCGCAGGTCG CCGCACTCTC GGCATCCGGC
GCAGCAGTCG GAGCACTGAT CGCACTCCCA CTGGGCCCAT GGGTGGAACA CCGCCGCAAA
CGACCGGTGA TGATGGCGAT GGACCTGATG CGCTTCGCCG CCATGCTGAC CATCCCGATC
ACCTACGGCT TCGGCGCCCT GACCTTCGCG CAACTGCTCG CGGTGGCAAT CGTGGTCGGA
GCCGCCGACA TCACCTTCAC CGCAGCGAGC GGCGCCTACC TGAAAGCACT GCTGCCACGC
GAGGACTTGC TGACCGCCAA CGGACGATTC GAGTCGACGC AGTGGTCAGC GATCGTCCTG
GGACCCCCAC TCGGCGGAGC AGCATTCGCA CTACTCGGAC CGGTGGCCAC GGTGATCGCG
GACGCGGTGA GCTACCTGCT GTCGGCGCTG GGAATCCGAG CGATCGGCGC AGGGCATGAG
GCTGATGCTG GTGATCGTGC TACCACTGTG CCTGAGGCTG GCGACAGGAT CCGCGACCGC
TCCACCGGCC TCCGCGCCGC CGATCTCGTC GCCGGCTGGC GCCATATCCT CGGCAACCCG
GCCCTGCGTC CGCTGCTGCT CAACAATGCC ATGGTCAGTG GCCTGATCAT GGCCGGGGAG
CCGTTGCTCT CCGTCCTGAT GCTCGGGCCG CTGGGCTTGG CGCCGTGGGA GTACGGCCTC
GCATTCGCCA TTCCGTGTCT CGGCGGCCTG GTCGGCTCAC GTCTCGCGCC GCGTCTTGTC
GCGCGCTTCG GTCGTGCCAC GATCCTGCGC GTCGCCGGCA CGCTTCGGGC GGTCTGGCCG
GTCGGCTTGG CGTTCCTGCA GCCGGGCCTT CCCGGGCTCG TCCTGGTCGT CGTGCTCGAG
ATGGGTCTGA TCACCACCAT CAGCGTCTAC AACCCGGTGC TGGCGACCCA TCGGTTGGAG
CAGGTCGGCC CAGGTAACGT CACGCGCGTC CTGTCCGCCT GGTCGATCAC CACCAAGACC
ACCATCGCGG CGGCCACCGC GCTGTGGGGT GTGATCGCCA CCGTGACCAG CCCGCGGTTC
GGGCTCGGGT TGGCCGGTGC GCTGCTGCTG GCCTCGCCGC TGCTGCTGCC GCGTGGCGAG
CGGGTCGGGC TGCTCGCGGA GCATGCGCCG GATCCCGTCA GCTCAGTCGG CTAG
 
Protein sequence
MADGPNATGR RKLGRPFTRL WSAYAISTLG TYFAFNAFSL ILIRILHAGA AQVAALSASG 
AAVGALIALP LGPWVEHRRK RPVMMAMDLM RFAAMLTIPI TYGFGALTFA QLLAVAIVVG
AADITFTAAS GAYLKALLPR EDLLTANGRF ESTQWSAIVL GPPLGGAAFA LLGPVATVIA
DAVSYLLSAL GIRAIGAGHE ADAGDRATTV PEAGDRIRDR STGLRAADLV AGWRHILGNP
ALRPLLLNNA MVSGLIMAGE PLLSVLMLGP LGLAPWEYGL AFAIPCLGGL VGSRLAPRLV
ARFGRATILR VAGTLRAVWP VGLAFLQPGL PGLVLVVVLE MGLITTISVY NPVLATHRLE
QVGPGNVTRV LSAWSITTKT TIAAATALWG VIATVTSPRF GLGLAGALLL ASPLLLPRGE
RVGLLAEHAP DPVSSVG