| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6780 |
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| Symbol | |
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| ID | 8338144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7826316 |
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| End bp | 7827647 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644959870 |
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| Product | 3'-5' exonuclease |
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| Protein accession | YP_003117463 |
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| Protein GI | 256395899 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.780317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGAGTT CCAGTACGCC GGGCGGACCG GCGAGCCCCG AGCAGACCCC GAAGGCCGCC
GAAGCGCCGA CCGGCCTGGT CCCGCTGCTG GAACCGCGTG AAGGCCTGCC CCCGGTAACG
GACACCGAGC AGGCGCTGGC CGCCGCCGTC GAGGCGCTGG CGGCCGGCAC CGGCCCGGTC
GCCGTGGACG CCGAACGGGC CAGCGGCTAC AAGTACAGCC AGCGCGCCTA CCTGGTCCAG
ATACGCCGCC AGGGCGCCGG CACCTTCCTC ATCGACCCCA TCGCCTGCCC GGACCTGTCG
GCGCTGGCCG GCGACGGCCC GGCGCTGGCC GGCGCCGAGT GGGTCCTGCA CGCCGCCTCC
CAGGACCTGG CCTGCCTGGC CGAGGTCGGC ATGCACCCGC CCGCGCGCCG CCCCGACGGC
ACCGGCGGGC TGTTCGACAC CGAACTCGGC GCCCGCCTCG GCGGCCACGA GCGCGTGGGC
CTGGGTCCCC TGGTCGCCGA AGTCCTGAAG CTCGAGCTCG AGAAGGGCCA CTCGGCCTCC
GACTGGTCGA CCCGCCCCCT GCCCGAAGCC TGGCTCCGCT ACGCCGCCCT CGACGTCGAA
GTCCTGGTCG AAGTCCGCGA CATCATCGAG GACGAACTCC GCGGCGCCGG CAAACTCGAC
TGGGCCCGCC AAGAATTCGA CGCCGTGGCC AGCGCCCCGC CCCCCAAACC CCGAGCCGAA
CCCTGGCGCC GCACCTCCGG CCTCCACAAA GTCCGCCGCC CCCGCCAACT CGCCGTAGTC
CGAGCCCTCT GGGAATCCCG CGACGAACTA GCCCGCCGCC GCGACATGAC CCCCACCCGA
GTCCTCCCAG ACCAAGCCAT CATCGACTCA GCCCTGTCCC TGCCCGGCAC CGCCGCCCAA
ATGCGCACCA TCCCCGGCTT CACCGGCCGC ATGCGCTCCA ACGACGTCCC CCGCTACTTC
GAAGCCCTGA CCCAAGCCCG CCAACTCAAG GACTCCGAAC TCCCCAAGCC CGGCGCCGCC
CCCAGCGACG GCCCCCCGCC CGTCCGCGCC TGGGCAGACA AGGACCCCGC CGCAGCGGAG
CGCCTGACTG CGGCACGCGA GGCCGTGGGC GCCTTGGCGG CGCAGCACTC GCTGCCGGTC
GAGAACCTGC TGGCGCCGGA TTCATTGCGC CGCCTGTGCT GGACCCCGCC GGCACCCGAC
CCGAGCGACG AGCAGGTGTC AGCCTTCCTG GCCGGCGCGG GCGCCCGCCC CTGGCAGGTC
GCACTGACAA CGCACACCAT CGGCGAGGTG CTGCGCCGGG TGGCGGCGCG GGCGGTTTCG
GCGGGGGAGT GA
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| Protein sequence | MTSSSTPGGP ASPEQTPKAA EAPTGLVPLL EPREGLPPVT DTEQALAAAV EALAAGTGPV
AVDAERASGY KYSQRAYLVQ IRRQGAGTFL IDPIACPDLS ALAGDGPALA GAEWVLHAAS
QDLACLAEVG MHPPARRPDG TGGLFDTELG ARLGGHERVG LGPLVAEVLK LELEKGHSAS
DWSTRPLPEA WLRYAALDVE VLVEVRDIIE DELRGAGKLD WARQEFDAVA SAPPPKPRAE
PWRRTSGLHK VRRPRQLAVV RALWESRDEL ARRRDMTPTR VLPDQAIIDS ALSLPGTAAQ
MRTIPGFTGR MRSNDVPRYF EALTQARQLK DSELPKPGAA PSDGPPPVRA WADKDPAAAE
RLTAAREAVG ALAAQHSLPV ENLLAPDSLR RLCWTPPAPD PSDEQVSAFL AGAGARPWQV
ALTTHTIGEV LRRVAARAVS AGE
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