| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6735 |
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| Symbol | |
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| ID | 8338099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7769712 |
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| End bp | 7771586 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644959829 |
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| Product | WD-40 repeat protein |
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| Protein accession | YP_003117422 |
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| Protein GI | 256395858 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.709913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGGGGC ATGCGGGGCG TTTTCGGGAG CTGCTGTGCC GGCTGTCGTG CGTGTCGGGA
GGGGTGGATA CCTTTTCCCG CATGGGTGAG TTTGAGGTTG GCGGGTTGTT GCAGCTGATG
CGGGGTGCTG ATCCTGCGGA TCCGGGGACG TGGGCGGGGT GGCGGGGTGG GTGGGAGGAG
CTCGTCGATG AGTTCCTTGA TGAGGGTGCG TTGGATGATG GCGCTTATGT GGTGATTCCG
CAGGTGATTG ATGCGGCGGT TGGGTTGGCG CCGGAGCATA TGGTCGATTT CTGGATACGG
CTGGGGTATG CCGTTGCCGC GCCGGATTCG GGGGCGGTTC CTGCTGACCT TGCGGCGGGG
TACGTGGCGG CGTTGCGGCG TGCGGAGCAG GCTGTGGTGC GGGTGCTGGC TGCTGCTGAT
GTTCCTTTCA CCAGGTGCAC CGACTTGGTC CTGTCGGGAG TGGCGTTCAG CGGGCATCGC
ATCGGGCGTG CGTTGTGGGC GATCAGTGAT GTGCTCAGCG ATCACGTTCT CCATTGTCCG
GGCTGCGACT GGGAGTGCGA CTACAGCACG GTGGTTCCGG GTCTGCCCTC GCGGGCGGAG
GGGCACATGT GGACGGAGAG CGGCATCCCA CTGGACGCCT CACCTCAGGC AGTCCTCGCC
ATGGCCGCCA GCCTTGTCGC CACGAAGGGG ACGCCTACGT GGGCCGCCGA GGAGGCGGCG
GAGCAACTCA GTGTGCTCAT GGGGTGCTTC CAGTGCGCAC ACTGCGGAAA CACATGGTCG
ATCGCCGACA GCTTGGCGCC GCCGCCGGAC GGCGCGCGTC CGCTGGATCC CGATTCTCTG
GTGGTGCTCG ATACTCCGGT GCCGGCCGGG CAACCCGTCT CACCGACCGA GGAGACGGCG
ATGATGGCGG TGACGGCGTT GCTGGGCTGC GACGCCGGCG TCAACGCGGT GGCGATCGTG
GCGGGCTCGG ACCGGCCGAC GCTGGTGGTG GGCGGCGGAG ATCGTGGGCT GATTCATGTG
TGGGACATGG CGACCGGTCA GGCTCTGCGC GAGCCGCTGG CCGGACACCC CGACCGGATC
TTGACGCTCG CCGCGATCCC CAAACCGGAC GGCGGCGCGT GGCTGGCCAG CGGCGGCGAA
GGCGGCTCGA TCGGTCTGTG GGATCCGTGG ACCGGGGAGA AGATCCGACA GCCGGAAGTG
ACATGGGCAG GCGGCGTCAG CGGCGTGTGC GCGGCAACCA TGCCCGACGG TCGCGTGCTC
CTCGCGTCAG CCAGGACACG CGGCGCGGTG CGGGTGAGCG AGCCGGTCAG CGGCGACATC
CGAGCACGCT TGAATCCCTT TGGGCATCCC ATCGCATCGA TCGCTCCGCT CCCGGTGGCT
GCCGGCTACA CGACGATCGC AGGGACGGAC CAGTCCGGCC GTGTATACGT GTGGGATCCG
AGCATCAGCG ACCCGCACGA GTGCGAACAC GGAGCAGCTC TCGCGCCCTC GAAGGATGGG
CTCGCCGACG CCGGCCACAC GTTCGTCCAG GCGGTCGCCG CCGTACCGCT GCGCGGAAAG
ACGCTGCTGG CCACCGGCGA CCGCAAAGGC AACCTCGCGC TGTGGGACCC GGCGACCGGG
ACCGCGACCG GGCAGACCCT GCCTTCCGAC GTCAAAGGTC GGACGCTGAG CGCCCTGACC
GCGACCGAGC TCCCAGACGG GCGCACCCTC GTCATCACCG GCAGCACCCA AGGCAGTACC
CTGCGATGGT GGGAGCCCGA GACCGGCGCC GTCTCGACGA TCGACGTCGG CGCGGCGGTC
ACGTCCCTGG CCGTCACGGG CTCGACGCTG GTCGTCGGGC ACACCCGCGG AGTGTTCATC
ATGCAGCTGG CTTGA
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| Protein sequence | MAGHAGRFRE LLCRLSCVSG GVDTFSRMGE FEVGGLLQLM RGADPADPGT WAGWRGGWEE
LVDEFLDEGA LDDGAYVVIP QVIDAAVGLA PEHMVDFWIR LGYAVAAPDS GAVPADLAAG
YVAALRRAEQ AVVRVLAAAD VPFTRCTDLV LSGVAFSGHR IGRALWAISD VLSDHVLHCP
GCDWECDYST VVPGLPSRAE GHMWTESGIP LDASPQAVLA MAASLVATKG TPTWAAEEAA
EQLSVLMGCF QCAHCGNTWS IADSLAPPPD GARPLDPDSL VVLDTPVPAG QPVSPTEETA
MMAVTALLGC DAGVNAVAIV AGSDRPTLVV GGGDRGLIHV WDMATGQALR EPLAGHPDRI
LTLAAIPKPD GGAWLASGGE GGSIGLWDPW TGEKIRQPEV TWAGGVSGVC AATMPDGRVL
LASARTRGAV RVSEPVSGDI RARLNPFGHP IASIAPLPVA AGYTTIAGTD QSGRVYVWDP
SISDPHECEH GAALAPSKDG LADAGHTFVQ AVAAVPLRGK TLLATGDRKG NLALWDPATG
TATGQTLPSD VKGRTLSALT ATELPDGRTL VITGSTQGST LRWWEPETGA VSTIDVGAAV
TSLAVTGSTL VVGHTRGVFI MQLA
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