Gene Caci_6728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6728 
Symbol 
ID8338092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7761605 
End bp7762123 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content72% 
IMG OID644959822 
Producthypothetical protein 
Protein accessionYP_003117415 
Protein GI256395851 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00401956 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAACGG CGAACGGGCA GCAGACCTCC GGCACCAGTC GGACCACCTT CGAGGTGGCC 
TTCGACCTGT CGCCTGAGGC ACCGGACTGG CCGCCGGTCG CCGTGGAGCG CCTCTGGGGC
GAGCGCACGG CGGTGGACTC CGAGCTGCGC CTGCTGAACG TCCCCTTCTT CGCCCGCGGC
GTCGCCTACG GCGACCTGGT CCACGTCCGC CCCGACCACG ACCGCCGCGA GCTGGTCTTC
GAAAGACTGA ACGGCGAATC CGGCCACAGC ACGGTCCGCA TCACCCTCCT CGACGGCCGG
GCCCGCCGCG ACGTGCAGGA CCGCCTGCGC GCAGCCGGCT GCTCCTGGGA GACCGCCGCG
CAGTTCGCCG CCCTGCTGGC CGTGGACGTC CCCGCCGACG GCGACTACCG CGCACTGAGG
GACTGGCTCA CGGCCCGCAG CGGCGAGGGG GCGATCGAGT TTCAGGAGAG CGCGATCTCG
GCGCGGCATT TGGAGCAGGT GCCCAACTTT CCTGCGTGA
 
Protein sequence
MATANGQQTS GTSRTTFEVA FDLSPEAPDW PPVAVERLWG ERTAVDSELR LLNVPFFARG 
VAYGDLVHVR PDHDRRELVF ERLNGESGHS TVRITLLDGR ARRDVQDRLR AAGCSWETAA
QFAALLAVDV PADGDYRALR DWLTARSGEG AIEFQESAIS ARHLEQVPNF PA