| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6696 |
|---|
| Symbol | |
|---|
| ID | 8338060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 7715134 |
|---|
| End bp | 7716366 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644959790 |
|---|
| Product | putative transcriptional regulator, PucR family |
|---|
| Protein accession | YP_003117383 |
|---|
| Protein GI | 256395819 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2508] Regulator of polyketide synthase expression |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.944538 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.225314 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGATCG GGAGCTCGCG GCAGGAGTAC GACGAACAGA AGTTGGCCGA GCTGACGATG
CTCGCCGCTT TGATGCTGGA GCGGGCGGAG GAGCTCACCG AGACGGTGGT GACGCGGGTC
TACAAGCAGT TCCCTGTCTA CGCCGGCATG GTCAGCCGCG AGATGTTGCG GGCATCAGTG
CACGATCACG TCGTCTCCGC CTTCGATCCG ATGGCCCGCA GCCAGAAAGC CGACCTGCGC
GCCGCCGGAC CCACCGGCCG CGTAGGAGCC GCCGACGGCA TCCCGCTGAC CGTCGTGATG
GACGGCTACC GCGTCGCCTT CCGCGTGGTG TGGTCGGCGA TCGTGGAGAC GGCACGCGGG
ATGGGGATGT CCTCCGACGC GTGCCTGGAC GCCGCGACCA TCTTGATCGC GTCGCTGGAA
GCCTTCACCC GCGAGATGTC CACCGGCTAC CGCGACGAGC TGAGCCGCCA GATCCGCAGC
GAGGAACAGC GCCGCGCCGC GGTGGTCCAG GCGCTGCTCG AAGGGCGCCT CGCGGACACC
AACCTGTGGG AGGCCGCCGA ACAGCTGCGG CTGCCCGCCA GCGGTCCGTT CGTGGTGATC
GCCGCCCGCG TGCCGGCGAT AGGGCGGCAC GCGCTGCCGC ACATCGAGCA GGGCCTCGGC
GTCCTCGGCA TCGACTCGGC CTGGCGGCTG ATGCACGACG TCGAGATCGG CGTCGCCGCG
CTGCCCGGAC CGAGCGCACA GCTGGACCGC CTGGTCACCG CGTTGCACGT CGGCGAGGGC
GCGCGCGTGG GCGTGTCGCC GCCTTACGAC GACCTGCGCT CGACGTCGCT GGCGTTGCGC
CTGGCCCGGA TCGCTTTGCA CGGCGCGGCA GAGCGCCGCC GCGTCGTGGT GTTCGGCAGC
GATCCGCTGT CGGCGGTGGC GGGCAGCGCG CCGGACATCA TGCCGCGCGT GGCGCGCGGA
ATCCTGGCCG GGCTCGAGGA GCTGCCGATC CAGGACCGCA CGCTGCTGCT GGACACCTTC
GGCGCCTGGC TGGACGCCGA CGGCTCGGCG GGGGAGGCCG GACGCAGGCT GTTCGTGCAC
CCGAACACGG TGCGGAACCG GTTGCGGCGG CTGGAGAAGC AGACGGGGCG CTCGCTGTCG
AACCCGCGTG CCATCGCCGA GCTGATCCTC GCCTACGAGA TCGACAGCGG GATTCGCGCG
GCGGTGGCCG AGGCTGCCGC GTCGCCGGCG TAG
|
|---|
| Protein sequence | MEIGSSRQEY DEQKLAELTM LAALMLERAE ELTETVVTRV YKQFPVYAGM VSREMLRASV
HDHVVSAFDP MARSQKADLR AAGPTGRVGA ADGIPLTVVM DGYRVAFRVV WSAIVETARG
MGMSSDACLD AATILIASLE AFTREMSTGY RDELSRQIRS EEQRRAAVVQ ALLEGRLADT
NLWEAAEQLR LPASGPFVVI AARVPAIGRH ALPHIEQGLG VLGIDSAWRL MHDVEIGVAA
LPGPSAQLDR LVTALHVGEG ARVGVSPPYD DLRSTSLALR LARIALHGAA ERRRVVVFGS
DPLSAVAGSA PDIMPRVARG ILAGLEELPI QDRTLLLDTF GAWLDADGSA GEAGRRLFVH
PNTVRNRLRR LEKQTGRSLS NPRAIAELIL AYEIDSGIRA AVAEAAASPA
|
|---|
| |