| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6693 |
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| Symbol | |
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| ID | 8338057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7711578 |
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| End bp | 7712663 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644959787 |
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| Product | solute-binding protein |
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| Protein accession | YP_003117380 |
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| Protein GI | 256395816 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.741215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.17095 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCACC TGCGTCCGGC CCGGACCGCC GGTATCGTCC TCGCCGCGGC CCTGCTGGCC
GCGGCCGCCG CCGGATGCGG CAGTGCCGGA TCGAGCAACA AGTCCAGCTC CTCGGGAGGC
ACCGCGACCG GCTCGAACTC CAGCGTCCGC ATCGGCATCC TGCTGCCGGA GTCCAAGACC
ACCCGGTACG AGGCTTTCGA CAAGCCGCTG CTGGAGGCCG AGCTCCAGGC CCGGATGCCC
GGCGTGCAGG TCGACTACTA CAACGCCGGG CAGGACGCCA CGGTGCAGCA GACCCAGGTC
GACACCGCCC TGACCAAGGG CGACAAGGTC CTGATCCTGG ACGCCGTGGA CTCCAAGTCC
ATCCAGGCCT CCGTGCAGAA GGCGCACGAC GCCGGCGTGA AGGTCGTCGC CTACGACCGT
CTCGCGCAGG GGCCGGTGGA CGCGTACGTC TCCTTCGACA ACGTGAAGGT CGGCGAGCTG
CAGGGCACCG CGCTGCTGGC CGCGCTGGGC TCGAACGCCG CCACCCAGCA AATCGTGATG
ATCAACGGCT CGCCCACCGA CCCGAACGCC GCGCAGTTCA AGCAGGGCGC GCACTCGGTG
CTCAACGGCA AGGTGAAGAT CGGCAAGGAG TACGACACCC CGAACTGGGA CCCGAACACC
GCCAACCAGG AGATGGCCGG CGCCATCACC GCGCTGGGGG CGCCGAACAT CCACGGCGTC
TACTCCGCCA ACGACGGCAT GGCCGCCGGT ATCGCCACCG CGCTGAGCGC GGCGAACCTG
CACGTGCCGC TGACCGGCCA GGACGCCCAG CTCGACGCGC TGCAGCGGAT CCAGGCCGGC
ACGCAGACCA TGACGATCTA CAAGCCGTAC AAGCCGGAGG CCACCGCGGC CGCCGACGTG
GCCGTGGAGT TCGCGCAGGG CCGGACCCCC GGCAACGACC TGCTGCCGGA CAAGCAGACC
TCGGGCTCCG GCAACGTGGT CCCGTCCAAG CTGATCACCC CGATCGTCGT GGACAAGACG
AACATGTGCA CCACCGTCGT CAAGGACGGC CTGTACACCG CCGCGCAGAT CGGCATCACC
TGCTGA
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| Protein sequence | MQHLRPARTA GIVLAAALLA AAAAGCGSAG SSNKSSSSGG TATGSNSSVR IGILLPESKT
TRYEAFDKPL LEAELQARMP GVQVDYYNAG QDATVQQTQV DTALTKGDKV LILDAVDSKS
IQASVQKAHD AGVKVVAYDR LAQGPVDAYV SFDNVKVGEL QGTALLAALG SNAATQQIVM
INGSPTDPNA AQFKQGAHSV LNGKVKIGKE YDTPNWDPNT ANQEMAGAIT ALGAPNIHGV
YSANDGMAAG IATALSAANL HVPLTGQDAQ LDALQRIQAG TQTMTIYKPY KPEATAAADV
AVEFAQGRTP GNDLLPDKQT SGSGNVVPSK LITPIVVDKT NMCTTVVKDG LYTAAQIGIT
C
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