| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6688 |
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| Symbol | |
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| ID | 8338052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7707532 |
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| End bp | 7708752 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644959782 |
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| Product | ROK family protein |
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| Protein accession | YP_003117375 |
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| Protein GI | 256395811 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.395851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGAC TGTGGCATTG TCAAGACATG CCCGCGCCCA CCAGCCCCGC CGGCCCGGCC
AGAGCGACCG GCTCCGCCGA CCGCGCCGTC CCCAACCCCG CCCGGCAGGG GAGCATCCGC
AACGCCAACC TGGCGCTGCT CTACGGCCTG ATCCTGGACG CCCCGGCGCC GCTGTCCCGC
GCCGCGCTGG CCGCCACCAC CGGTGTGACC CGCGCCACAG CCTCCGCGCT GGCCGACACG
CTGCTGGAGG CGGGACTGGT CGCGGAAGTC TCACCGCCGC CGGCCACCGG CGCGGGCCGT
CCGGCCGCCG GCCTGGTCCC GGCCGCCGAG GGCCCGGCCG GGCTCGGGCT GGAGATCAAC
GTGGACTACC TGGCGGCCTG CGTGGTGGAC CTGACCGGCG CCGTCCGCGC CACCGTCATA
TCCGCGGGCG ACCAGCGCGA CCGCTCGGTG TCGGAGGTGC TGGCCGATCT GGCCGGGCTG
GCGCGCCAGG CCGTCTCGGA GGCCGGGCTG ACCGTCGCCG GCGCCGCGGT CGCCGTCCCG
GGTCTGGTCG AGGCGCCGCA CGGACGGATC CGGAGCGCGC CGAACCTGGT GTGGCAGGAC
GTGGAGATCG GCGCGGCGCT GCGCAGCGCG CTGCCGGAGA CGCCGTTCGA GCCGGTCGTC
GGGAACGAGG CGGATTTCGC AGCCCTGGCC GAGGCGCACG GGGTTTTCGA CGGGGACGCG
GACGGCCCGG CGGCGCCGCT GACCGACTTC CTGTACGTCT CGGGCGAGAT AGGCGTCGGC
GCGGGCGTCA TCCTGGACCG CGAGCTGTTC CGCGGCGCGC GGGGGTGGGC CGGCGAGATC
GGGCACGTCA CGGTCCAGCC CGAGGGGGTC CAGTGCCGCT GCGGCGCGCG GGGCTGTCTG
GAGACTGTCG CAGGACTCGA AGCGCTGCGC CGCGACGGAC CCGAAGCCGC TGCTTCGGCA
CTCGGCCGGG CGGCAGCGGC CGCGGTGAAC CTGCTGGATC TGCCGGCGGT CGTCCTCGGC
GGCGCCTATG CCCGGCCGGA GTTCGCCGCG CTGGTTCCGG GGGTGGAGAA GGCACTGGCC
GACCATGTGA TCTCGGCGCG ATGGGCTCCG GTCGCCGTGC ACGTGTCGCG GCGCGGAACC
GCGGCGGCGG TGACCGGCGC GGCGACGGCG GTCATCCGGC GGGTGCACGC CGATCCGGCG
GCTTGGATGG CGGCACGCTG A
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| Protein sequence | MDGLWHCQDM PAPTSPAGPA RATGSADRAV PNPARQGSIR NANLALLYGL ILDAPAPLSR
AALAATTGVT RATASALADT LLEAGLVAEV SPPPATGAGR PAAGLVPAAE GPAGLGLEIN
VDYLAACVVD LTGAVRATVI SAGDQRDRSV SEVLADLAGL ARQAVSEAGL TVAGAAVAVP
GLVEAPHGRI RSAPNLVWQD VEIGAALRSA LPETPFEPVV GNEADFAALA EAHGVFDGDA
DGPAAPLTDF LYVSGEIGVG AGVILDRELF RGARGWAGEI GHVTVQPEGV QCRCGARGCL
ETVAGLEALR RDGPEAAASA LGRAAAAAVN LLDLPAVVLG GAYARPEFAA LVPGVEKALA
DHVISARWAP VAVHVSRRGT AAAVTGAATA VIRRVHADPA AWMAAR
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