| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6668 |
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| Symbol | |
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| ID | 8338032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7683220 |
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| End bp | 7684128 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644959762 |
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| Product | squalene synthase HpnC |
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| Protein accession | YP_003117355 |
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| Protein GI | 256395791 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03464] squalene synthase HpnC |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.237097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGG CCAGCCGGCT CGACACCGCT AGCGGGCCCG GTCCGCGGGC GGCGAGTGCC
ACGCGTCCGG GCGCCGGCGA TCCGGCCATG CCGCCCGAGC GGACCATCCG GGAGAACTTC
CCGGTGGCGC TGCGCATCCT CCCGGCCCGG CACCGGGCGG CGCTCGGCGC CGTCTACCGG
TACGCCCGCC TGATCGACGA CATCGGCGAC GAGGCGCCGC CGGCCGACCG CGGGCGGCTG
TTCGACCTGG TGGACCGGGA CATCGACCGG ATCTTCGCCG GCACCGCCCC GGAGCTGCCG
GCGCTGCGCG CGATCGGCGC CGTCGCCCGG GAGCACGGTA TCCCGGAGGC GCCGCTGCGC
AAGCTGGTCC AGGCCAACCG CCAGGACCAG GAGATCCACC GCTACGCCAC CTGGGACCAG
CTCGTGGAGT ACTGCGCGCT GTCCGCCGAC CCGGTCGGCC ACCTGGTGCT GCACGTGTTC
GACGCCGCGT CCCCCGAACG GCTCGCGCTG TCGGACCACA TCTGCACCGC GCTGCAGGTC
ATCGAGCACT GCCAGGACGT CGCCGAGGAC TTCGCCGACG GCCGGGTCTA CCTGCCGGCC
ACCGACCTGA AGCTGTTCGG CTGCACCGAC GCCGACCTGG GCGCCGAGAC CACACCGACC
CGGCTGCGCG GCGTGGTGGC CCGCAACGCC GACCGCGCCG CCGCGCTGCT GGACGAGGGC
GCGCCGCTGA TCGGCAAGCT CGATGGCTGG GCCCGGGTCG CGGTCGCCGG CTACCTGGCC
GGCGGCCGCG CCACCCTGGC GGCGCTGAGC GGCGGCGCCT ACGACGTGCA CGCCGCCCGC
CTGCGCCCGA GCCGCGCCCG GACCCTCGGC GAGGCACTGC TGATCCTCGG AAGGGATGTG
GCCAAGTGA
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| Protein sequence | MLKASRLDTA SGPGPRAASA TRPGAGDPAM PPERTIRENF PVALRILPAR HRAALGAVYR
YARLIDDIGD EAPPADRGRL FDLVDRDIDR IFAGTAPELP ALRAIGAVAR EHGIPEAPLR
KLVQANRQDQ EIHRYATWDQ LVEYCALSAD PVGHLVLHVF DAASPERLAL SDHICTALQV
IEHCQDVAED FADGRVYLPA TDLKLFGCTD ADLGAETTPT RLRGVVARNA DRAAALLDEG
APLIGKLDGW ARVAVAGYLA GGRATLAALS GGAYDVHAAR LRPSRARTLG EALLILGRDV
AK
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