Gene Caci_6624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6624 
Symbol 
ID8337988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7633600 
End bp7634127 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content66% 
IMG OID644959718 
Producthypothetical protein 
Protein accessionYP_003117311 
Protein GI256395747 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.299419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.194539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGGT TCGCGGGGCG GTTCTTCGAC GTCGGCGCGG AGAGGGTGTA CGCGGACGAC 
AGGGTGACGC GTGAGGATCT TGTTGCGCTT GCCGGGATGC CTCGTCTTCG GGCGCTGAAT
CTCAATACGG CGGCCATTGG CGACGATGAT CTGGAGGCGG TGGGCCGCCT GGTCGGGCTG
CAGGATCTGG ATGTGAGTAC CACTGACATC ACCGATGCCG GTGTGCGACA TCTCAGTGGC
CTGACTGACA TGCGCCACCT GCGGATCAAG GAGACCCGGG TCACCGATGC CGGGTTGCGG
CTGCTGGCGC CGATGGGGGC GTTGGAGACG GTCAACCTGC GGCGGCTCGA CATCAGTGAC
GAGGGGCTGC GCGGGTTGGC TGAGCGGCAC CGGTGTCTGG ACACGATTGT CATCTCGGAC
GAGGTGGACG AGTGCCGGTT CACGGTTGCG GGCCTGGCCG AGGTGCAGCG CCTGCTCCCG
GCGTGTGAGA TCGTGGTGGT CGGCCGCGGT ACCTTCCCCC ATATCTGA
 
Protein sequence
MIRFAGRFFD VGAERVYADD RVTREDLVAL AGMPRLRALN LNTAAIGDDD LEAVGRLVGL 
QDLDVSTTDI TDAGVRHLSG LTDMRHLRIK ETRVTDAGLR LLAPMGALET VNLRRLDISD
EGLRGLAERH RCLDTIVISD EVDECRFTVA GLAEVQRLLP ACEIVVVGRG TFPHI