| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6602 |
|---|
| Symbol | |
|---|
| ID | 8337966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 7610631 |
|---|
| End bp | 7611980 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644959696 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003117289 |
|---|
| Protein GI | 256395725 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG ACCTCGCCGG GCGGATCGCA GCGCTGATGC CCCGGGCCAA GAAGGATCTG
GCCGAGCTGG TGGCCATCGC CTCGGTGGCC GATCCGCGAC AGTACCCTGC GGAGAACTGC
CGCCAAGCCG CCGACTGGCT GGTCGCGGCG TTCACCGAGG CCGGGCTGCG CGACGTCCGC
TTGGAGCCGA CCCCGGACGG CAGCCTCGCC GTCCTCGGCG AGCGCCCCGC GCCGCCCGGG
GCTCCGACCG TGCTGCTGTA CTGCCACTAC GACGTCCAGC CGCCGCTGGA CGACGTGGCC
TGGACCTCGC CGCCGTTCGA ACTGACCGAG CGGGACGGCC GCTGGTACGG ACGCGGATCA
GCGGACTGCA AGGGCAACAT CGTCATGCAC CTGACGGCGC TGCGCGCTCT GGGCGAGGAC
ATCGGGGTCG GCCTGAAGCT CGTCGCGGAG GGCTCCGAGG AGCAGGGCAC CGGCGGCCTG
GAGGCCTTCG TCCCGCCGCA TGCCGCCGAG CTCCACGCCG ACACGCTCCT GATCTGCGAC
ACCGGGAACG CCGCTGTCGG CGTCCCCACG GCGACCATCA CGCTGCGCGG CATGGCCAAC
GTCGTGGTCA CCGTCTCCAC ACTGGCCGGC GACGTCCACT CCGGAATGTT CGGCGGTCCG
GCGCCCGACG CCCTCGCCGC GCTGATCCGC ATGCTGGATT CGCTCCGCGG TCCGGACGGC
GGCACCCGCA TCGAAGGGCT GGACGGCGAC GGAATCTGGG ACGGCGTGCC CTATGACGAA
GACCAGTTCC GGAAGGACGC GGGCGTCCTG GACGGCGTTC GGCTGACCGG CTCGGGGACC
GTCGCCGACC GGGTCTGGGC GCGCCCGGCG GTCACCGTGC TCGGCATCGA CTGCCCGCCT
GTGGTCGGGT CCGCCGCCGC TGTGCCCGCG AAGGCGCGCG CCCGGGTGAG TCTGCGGGTG
CCGCCGGGGA TCGATCCGCG GGCGGCCCGC GCCGCGCTCG ACGCGCACCT GCGCAAAGCC
GCTCCGTGGG GCGCCGTGGT GGACATCGAG GACGAGAGCT TCGGCTCGCC CTTCCGGGCG
CGGACCGGCG GCAAGGCCTA TGCCGCGCTG GATCGTGCGG CGCGGGAGGT GTACGACAAG
CCTCTGGCAT TCCTGGGCCA AGGCGGCTCG ATCCCGCTGT GCAACGTCCT GGCCGCGACC
TATCCGGACG CCGAGATCAT CCTGATGGGC GTCGAGGAAC CCCGCTGCGC CATCCACGCC
CCGAACGAGA GCGTCGACCC CTCGGAGATC GAGAACATGG CCCATGTCGA AGCGCTCTTC
CTGCGCGACT ACGGCAGCGG CCGGGACTAG
|
|---|
| Protein sequence | MTDDLAGRIA ALMPRAKKDL AELVAIASVA DPRQYPAENC RQAADWLVAA FTEAGLRDVR
LEPTPDGSLA VLGERPAPPG APTVLLYCHY DVQPPLDDVA WTSPPFELTE RDGRWYGRGS
ADCKGNIVMH LTALRALGED IGVGLKLVAE GSEEQGTGGL EAFVPPHAAE LHADTLLICD
TGNAAVGVPT ATITLRGMAN VVVTVSTLAG DVHSGMFGGP APDALAALIR MLDSLRGPDG
GTRIEGLDGD GIWDGVPYDE DQFRKDAGVL DGVRLTGSGT VADRVWARPA VTVLGIDCPP
VVGSAAAVPA KARARVSLRV PPGIDPRAAR AALDAHLRKA APWGAVVDIE DESFGSPFRA
RTGGKAYAAL DRAAREVYDK PLAFLGQGGS IPLCNVLAAT YPDAEIILMG VEEPRCAIHA
PNESVDPSEI ENMAHVEALF LRDYGSGRD
|
|---|
| |