Gene Caci_6587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6587 
Symbol 
ID8337951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7597956 
End bp7598789 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content66% 
IMG OID644959681 
Producthypothetical protein 
Protein accessionYP_003117274 
Protein GI256395710 
COG category[R] General function prediction only 
COG ID[COG0121] Predicted glutamine amidotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCGCT GGCTCGCCTA CTCAGGCTCG CCCGTCCTGT TGAGCGACGT GCTGTACACG 
CCGATCCGCT CGTTCATCGA CCAGAGCCTG CACTCCGAGC TCGGAGCCGA GACCACCAAC
GGCGACGGGT TCGGCATCGG CTGGTACGAC GGCCGCGACA CCCCCGGCAT CTTCCGCGGC
GTCGAACCGG CGTGGAACGA CACGAACCTG CGCGAGGTCT CCGAGCACGT CACCTCGCCC
CTGTTCTTCG CCCACATCCG CGCCGCCATC GGGTCCTCGG TCCAACAGAC GAACTGCCAT
CCCTTCCGCT ACGGGAAGTG GCTGTGGATG CACAACGGCT TCATCGACGG GTTCGCGAAG
ATCAAGCGCG ACATGGCCTT CGCCGTCGAC CCCTCGCTCT ACCCCCTCAT CGTGGGCACG
ACCGACACCG AGCTGCTGTT CTACCTGGCG CTCACCTTCG GGCTCGAAAC CGATCCGGCG
AAGGCCGTGG CCCGGGCCAT CGGCTTCGTC GAGGCGCAGG GCCGGAAGGC CGGGATCGAC
TACCCCTTCC AGGGGACGAT CGTGACCAGC GACGGCCATT CCACATGGGC GTTCCGCTAT
TCGAGCCAGG GCAAATCGCG AACCCTCTTT CTCACGCGCG ACGTACCGAC TTTGCGGGAG
CAGTACCCCG ACGCGCCCAT CATGCAGAAG GTCTCCGACG ACACGCGGTT GGTCGTCTCC
GAACCGATCG GCAACCTGCC CGGTGCCTGG CTCGAGATAC CCGAGGCCAC ATACGGCATG
GTGCAAAAGG GCAACGACGA GCTCCGCCCT TTCTCGCCTG AACCGCCGGC GTAA
 
Protein sequence
MCRWLAYSGS PVLLSDVLYT PIRSFIDQSL HSELGAETTN GDGFGIGWYD GRDTPGIFRG 
VEPAWNDTNL REVSEHVTSP LFFAHIRAAI GSSVQQTNCH PFRYGKWLWM HNGFIDGFAK
IKRDMAFAVD PSLYPLIVGT TDTELLFYLA LTFGLETDPA KAVARAIGFV EAQGRKAGID
YPFQGTIVTS DGHSTWAFRY SSQGKSRTLF LTRDVPTLRE QYPDAPIMQK VSDDTRLVVS
EPIGNLPGAW LEIPEATYGM VQKGNDELRP FSPEPPA