Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6571 |
Symbol | |
ID | 8337935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7571858 |
End bp | 7575091 |
Gene Length | 3234 bp |
Protein Length | 1077 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644959665 |
Product | hypothetical protein |
Protein accession | YP_003117258 |
Protein GI | 256395694 |
COG category | [S] Function unknown |
COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.997096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGGGG ACGAGACGGC GGCTGGTGCT GCCGCAGCCG ACGAGGTCGA GGAGCTGGTT GGCAGATTCG CTCGCAGCGG TGACCGGGGT GCTATCGACA GGGCGGTCGC CGTCGCCGCG GCTGCCGTCG ACGGGCTGGC GGACGGTGAT GTGGACCGTG CGGCGGCGCT GGCGAATCTC GCTGTGACGC TGATGCGGCG GTATGAGGCG CTCGGCGATG GCGCGGATCT CGAGCGGGCG CACGAGTCGA TCACGGTGGC CTGTGCTGAG GCGCCGCCTG GGAGTCCGCA TGCCGAGGGT GTGCTGACCA TCGCCGGCAG CGTCGCCATG ACTCGGCATA CGCGCTCCGG CGACGTCCAA GAGCTCAGGG AAGCGGTACG GATCACGCGC GCCTTGTGCG ATGGGGCGGC TGAGTCCGCG CGGCGGCGCA TGTATCTGAG CAATCTGACC TTCATGCTCG TGCGGCTGGC TGAGGCTACC GATGACAGGG CTCTGCTTCT TGAAGCGGAG GCGGCTGGAC GCGAGGCGGT CGTGTTGAGC GACCCGGATG ATCCGAGCAA CGCGCTTGTC TACAACAACC TCGCCATCGC GCTGCACCGC CGCTACACCG TGTCCAATGA TGTGGCGTTT CTGGCCGAGG CGGTCGAGTG GCAGGTCAAG ACGCTGGCTG GGGTCGAGCC GGCGCACCAG GAGTATCGGA AGTGGCAATC CAACCATGGT GCGACGCTGC GCGAACTCCA CGGTCGGACC GGCGAGGCGG AACTGCTGCG GCGGGCTGTC GAGGCCTGCC GGGCAGCGAC TCAGGGGGCT GATCCCCGCC ATCCCATGTT CGCCCACTGG CAGGCGAACC TTTCTGCGGC GCTGCTGCTC GCCTACCGGG AGTCGGGGGA TTCCAGCCTG CTGAGGCAAG CGGTGACGGC CGGCCGTGCC GCGTACGAGG CGGCCGGGCC GGGGAGCCCT GATCTGCCGT TGTTGCTGAC GGACCTCGGT GCGTTGCTCG ACCAGGCGAG TCTGCGCACC AGCGACGCGG AGGAGCTGGC CCAGTCGGTG GAGATGCTGC GCCGGGCGGC GGTGACCGTG CCGCGCAAGC ACGTGGCGTA CTCCATCGTC CACACCAACT TGGCGATCGC CCTGCTGCGG ACCGCCGAGG CGGACCCGGC CGGCGGATTC GTGCCGCTGC TCGCCGCGAT CGGTCACGCG CGCAAGGCGC TCAAGCGGAT CGGGCGCGAC GATCCGCACC GGGCCGAGTT GCTGGGCGCC ATGAGCGCCG CGCACCTTCG GCTGCACGGC TTCCGCGGCT TCGGCAGCGC TCTGATCCGC GCCGTCCGCG ACGCGGAGGC GGCCTTGGCC GCCACGCCGA GCCGCCACCC GGACCGCGCG GTGCACCTGG GCCGGCTCGC CGTGGTGCGT TATACGCAGT ACCAGCGCTA CGGCGACCGG AAGCTGCTAA TCGCGGCGCG CGACCTCCTG ATCGAGGCGG GGCGGCAGCC GGGAGCCCGG CTGATGACCA GGATCGACGC GCTGCGCGGC GCGGGTGAGT ACAGCGGCGA GGCCGGGCTC GGCAGCGACC GGCTCGGCCT GCTGGCGGAG GCCATCGACC TGGCGACCCG CGTCGCCCCG CGTACGCTGG CGCGGGTGGA CCGCGAGCAT CGGGTGAGCC TGCTGACGGG GCTGGCCACC GAGGTCGCGC AGGCCGCGTT GGACCAGGGG CAGCCTGAAC GCGCGGTCGA GCTGTTGGAG CAGAGCCGAG GGCTGTTGGC CGCTGATGTG CTCGACGCTC GGGGCACGGA TCTGGCGGCG CTGCGCGCGG TGCGGCCTGA TGTGGCCGGA GAGGTCGTGG CCCTGCGAGC CCGGTGGGAG CGGCTGGATC GGGCGCAGCC ACGACTCGGG GAGGTTACGG CGGATGCGCA GACCTCGGGC ATACCAGCGG CTCAACCAGC GCCGTCGCAG TCAGCACCAT CGGTGTCAGT GTCGGTGTCG GCGGCGGCGC CGACGGCATC ACAGGCGTCA GCCGTCGACC TCCTCGAGGA CCCCCAGCAG CTCTCCACTG AGCGGGCCGC CATCGGCGCC GCGTGGGACG CACTCGTCGC CGAGATCCGG ACCCTGGTCG GCTTCGCCGA CTTCATGCGG CCACCGCGCG TGCAGCGCCT GGTCGAGCAG CTTCCCGACG GTCCGGTCGT CTACGTCTAC GCTGGATCGG AACGCAGCGA CGCGCTGATC GTCTCCGGAT CCGGCGTCGA GTGCGTGCGG CTGCCGAACC TCCGCGCAGC CGAGGCAACT ACGCGCGCCG AACAGCTTCA CGCCGCATTG GCCGACGCCG AGAGCGACTA TGCGGACGTC GCCGAGGCTG CCCGGGAGAG TATGCGCGAG CTCCTGGTCT GGCTGTGGGA CACCATCGCG CAACCGGTCG TGGCAGCCCT CGGATACGAC GCCGCGCACG CTGATCCCGC GAATCACGCC GATCCCGCCA ATCCCGCCGA TCTCCCGCGC ATGTGGTGGT GTCCGGTCGG CGTGCTCAGC GAACTGCCGC TACACGCGGC CGAGTCCGGT CCGCACACCC TGCTCGACCG TGCCGTCCAC TCCTACACTG CCACCTTGCG CGCGCTCGGT GACGCCCACT CCCGTCCCGT ACCGCCGTCG CGCGCCGCGC TCGTCGTCGG CGCCCACGAT CTCACCGGGT CCGGACGGCT ACCGGCCGCC GAGCACGAAG TCCACACCGT AGGCCGCCTA CTCCCCCACG CAACGGTGCT CGACGCCCCG ACCGCGGAGT CGGTGCGGAC AGCCCTGCTC AGCCATCCGG TCGCTCACTT CGCCTGCCAC GGCGTCGCCG ATCGCAGCGA CCCGGCCGCC GGTCTGCTGC TGCTCGCCGA CCACGCCACC GATCCACTCA CTGTCGCCGA AGTCAGTGCC CTGCGTCTGG ACGGCCGGCT CGCGGTACTG ACGGCGTGTC AGACCACTGT CTCCGCGCCC ACGCTGGCCG ACGAGTCGGT GCATCTGAGC GCCGCGTTCC AGTTGGCCGG GTACCGGGCC GTGGTGGGCA CGCTGTGGTC GGTGTCCGAC GAGGCCTCGG CCCGACTCGC CAAAGACTTC TACAACACGC TGACCGCCGA AGGTACCGCA GAGCTCGACA CCGACCGCGC CGCGCGCGCC GTTCACGCCG CGGTACGCCG ACTTCGCCGC CATTATCGGA ACGCGCCGAA GGCCTGGGCC GGGTACGTCC ATGTCGGCTG CTGA
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Protein sequence | MRGDETAAGA AAADEVEELV GRFARSGDRG AIDRAVAVAA AAVDGLADGD VDRAAALANL AVTLMRRYEA LGDGADLERA HESITVACAE APPGSPHAEG VLTIAGSVAM TRHTRSGDVQ ELREAVRITR ALCDGAAESA RRRMYLSNLT FMLVRLAEAT DDRALLLEAE AAGREAVVLS DPDDPSNALV YNNLAIALHR RYTVSNDVAF LAEAVEWQVK TLAGVEPAHQ EYRKWQSNHG ATLRELHGRT GEAELLRRAV EACRAATQGA DPRHPMFAHW QANLSAALLL AYRESGDSSL LRQAVTAGRA AYEAAGPGSP DLPLLLTDLG ALLDQASLRT SDAEELAQSV EMLRRAAVTV PRKHVAYSIV HTNLAIALLR TAEADPAGGF VPLLAAIGHA RKALKRIGRD DPHRAELLGA MSAAHLRLHG FRGFGSALIR AVRDAEAALA ATPSRHPDRA VHLGRLAVVR YTQYQRYGDR KLLIAARDLL IEAGRQPGAR LMTRIDALRG AGEYSGEAGL GSDRLGLLAE AIDLATRVAP RTLARVDREH RVSLLTGLAT EVAQAALDQG QPERAVELLE QSRGLLAADV LDARGTDLAA LRAVRPDVAG EVVALRARWE RLDRAQPRLG EVTADAQTSG IPAAQPAPSQ SAPSVSVSVS AAAPTASQAS AVDLLEDPQQ LSTERAAIGA AWDALVAEIR TLVGFADFMR PPRVQRLVEQ LPDGPVVYVY AGSERSDALI VSGSGVECVR LPNLRAAEAT TRAEQLHAAL ADAESDYADV AEAARESMRE LLVWLWDTIA QPVVAALGYD AAHADPANHA DPANPADLPR MWWCPVGVLS ELPLHAAESG PHTLLDRAVH SYTATLRALG DAHSRPVPPS RAALVVGAHD LTGSGRLPAA EHEVHTVGRL LPHATVLDAP TAESVRTALL SHPVAHFACH GVADRSDPAA GLLLLADHAT DPLTVAEVSA LRLDGRLAVL TACQTTVSAP TLADESVHLS AAFQLAGYRA VVGTLWSVSD EASARLAKDF YNTLTAEGTA ELDTDRAARA VHAAVRRLRR HYRNAPKAWA GYVHVGC
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