Gene Caci_6571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6571 
Symbol 
ID8337935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7571858 
End bp7575091 
Gene Length3234 bp 
Protein Length1077 aa 
Translation table11 
GC content71% 
IMG OID644959665 
Producthypothetical protein 
Protein accessionYP_003117258 
Protein GI256395694 
COG category[S] Function unknown 
COG ID[COG4995] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.997096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGGG ACGAGACGGC GGCTGGTGCT GCCGCAGCCG ACGAGGTCGA GGAGCTGGTT 
GGCAGATTCG CTCGCAGCGG TGACCGGGGT GCTATCGACA GGGCGGTCGC CGTCGCCGCG
GCTGCCGTCG ACGGGCTGGC GGACGGTGAT GTGGACCGTG CGGCGGCGCT GGCGAATCTC
GCTGTGACGC TGATGCGGCG GTATGAGGCG CTCGGCGATG GCGCGGATCT CGAGCGGGCG
CACGAGTCGA TCACGGTGGC CTGTGCTGAG GCGCCGCCTG GGAGTCCGCA TGCCGAGGGT
GTGCTGACCA TCGCCGGCAG CGTCGCCATG ACTCGGCATA CGCGCTCCGG CGACGTCCAA
GAGCTCAGGG AAGCGGTACG GATCACGCGC GCCTTGTGCG ATGGGGCGGC TGAGTCCGCG
CGGCGGCGCA TGTATCTGAG CAATCTGACC TTCATGCTCG TGCGGCTGGC TGAGGCTACC
GATGACAGGG CTCTGCTTCT TGAAGCGGAG GCGGCTGGAC GCGAGGCGGT CGTGTTGAGC
GACCCGGATG ATCCGAGCAA CGCGCTTGTC TACAACAACC TCGCCATCGC GCTGCACCGC
CGCTACACCG TGTCCAATGA TGTGGCGTTT CTGGCCGAGG CGGTCGAGTG GCAGGTCAAG
ACGCTGGCTG GGGTCGAGCC GGCGCACCAG GAGTATCGGA AGTGGCAATC CAACCATGGT
GCGACGCTGC GCGAACTCCA CGGTCGGACC GGCGAGGCGG AACTGCTGCG GCGGGCTGTC
GAGGCCTGCC GGGCAGCGAC TCAGGGGGCT GATCCCCGCC ATCCCATGTT CGCCCACTGG
CAGGCGAACC TTTCTGCGGC GCTGCTGCTC GCCTACCGGG AGTCGGGGGA TTCCAGCCTG
CTGAGGCAAG CGGTGACGGC CGGCCGTGCC GCGTACGAGG CGGCCGGGCC GGGGAGCCCT
GATCTGCCGT TGTTGCTGAC GGACCTCGGT GCGTTGCTCG ACCAGGCGAG TCTGCGCACC
AGCGACGCGG AGGAGCTGGC CCAGTCGGTG GAGATGCTGC GCCGGGCGGC GGTGACCGTG
CCGCGCAAGC ACGTGGCGTA CTCCATCGTC CACACCAACT TGGCGATCGC CCTGCTGCGG
ACCGCCGAGG CGGACCCGGC CGGCGGATTC GTGCCGCTGC TCGCCGCGAT CGGTCACGCG
CGCAAGGCGC TCAAGCGGAT CGGGCGCGAC GATCCGCACC GGGCCGAGTT GCTGGGCGCC
ATGAGCGCCG CGCACCTTCG GCTGCACGGC TTCCGCGGCT TCGGCAGCGC TCTGATCCGC
GCCGTCCGCG ACGCGGAGGC GGCCTTGGCC GCCACGCCGA GCCGCCACCC GGACCGCGCG
GTGCACCTGG GCCGGCTCGC CGTGGTGCGT TATACGCAGT ACCAGCGCTA CGGCGACCGG
AAGCTGCTAA TCGCGGCGCG CGACCTCCTG ATCGAGGCGG GGCGGCAGCC GGGAGCCCGG
CTGATGACCA GGATCGACGC GCTGCGCGGC GCGGGTGAGT ACAGCGGCGA GGCCGGGCTC
GGCAGCGACC GGCTCGGCCT GCTGGCGGAG GCCATCGACC TGGCGACCCG CGTCGCCCCG
CGTACGCTGG CGCGGGTGGA CCGCGAGCAT CGGGTGAGCC TGCTGACGGG GCTGGCCACC
GAGGTCGCGC AGGCCGCGTT GGACCAGGGG CAGCCTGAAC GCGCGGTCGA GCTGTTGGAG
CAGAGCCGAG GGCTGTTGGC CGCTGATGTG CTCGACGCTC GGGGCACGGA TCTGGCGGCG
CTGCGCGCGG TGCGGCCTGA TGTGGCCGGA GAGGTCGTGG CCCTGCGAGC CCGGTGGGAG
CGGCTGGATC GGGCGCAGCC ACGACTCGGG GAGGTTACGG CGGATGCGCA GACCTCGGGC
ATACCAGCGG CTCAACCAGC GCCGTCGCAG TCAGCACCAT CGGTGTCAGT GTCGGTGTCG
GCGGCGGCGC CGACGGCATC ACAGGCGTCA GCCGTCGACC TCCTCGAGGA CCCCCAGCAG
CTCTCCACTG AGCGGGCCGC CATCGGCGCC GCGTGGGACG CACTCGTCGC CGAGATCCGG
ACCCTGGTCG GCTTCGCCGA CTTCATGCGG CCACCGCGCG TGCAGCGCCT GGTCGAGCAG
CTTCCCGACG GTCCGGTCGT CTACGTCTAC GCTGGATCGG AACGCAGCGA CGCGCTGATC
GTCTCCGGAT CCGGCGTCGA GTGCGTGCGG CTGCCGAACC TCCGCGCAGC CGAGGCAACT
ACGCGCGCCG AACAGCTTCA CGCCGCATTG GCCGACGCCG AGAGCGACTA TGCGGACGTC
GCCGAGGCTG CCCGGGAGAG TATGCGCGAG CTCCTGGTCT GGCTGTGGGA CACCATCGCG
CAACCGGTCG TGGCAGCCCT CGGATACGAC GCCGCGCACG CTGATCCCGC GAATCACGCC
GATCCCGCCA ATCCCGCCGA TCTCCCGCGC ATGTGGTGGT GTCCGGTCGG CGTGCTCAGC
GAACTGCCGC TACACGCGGC CGAGTCCGGT CCGCACACCC TGCTCGACCG TGCCGTCCAC
TCCTACACTG CCACCTTGCG CGCGCTCGGT GACGCCCACT CCCGTCCCGT ACCGCCGTCG
CGCGCCGCGC TCGTCGTCGG CGCCCACGAT CTCACCGGGT CCGGACGGCT ACCGGCCGCC
GAGCACGAAG TCCACACCGT AGGCCGCCTA CTCCCCCACG CAACGGTGCT CGACGCCCCG
ACCGCGGAGT CGGTGCGGAC AGCCCTGCTC AGCCATCCGG TCGCTCACTT CGCCTGCCAC
GGCGTCGCCG ATCGCAGCGA CCCGGCCGCC GGTCTGCTGC TGCTCGCCGA CCACGCCACC
GATCCACTCA CTGTCGCCGA AGTCAGTGCC CTGCGTCTGG ACGGCCGGCT CGCGGTACTG
ACGGCGTGTC AGACCACTGT CTCCGCGCCC ACGCTGGCCG ACGAGTCGGT GCATCTGAGC
GCCGCGTTCC AGTTGGCCGG GTACCGGGCC GTGGTGGGCA CGCTGTGGTC GGTGTCCGAC
GAGGCCTCGG CCCGACTCGC CAAAGACTTC TACAACACGC TGACCGCCGA AGGTACCGCA
GAGCTCGACA CCGACCGCGC CGCGCGCGCC GTTCACGCCG CGGTACGCCG ACTTCGCCGC
CATTATCGGA ACGCGCCGAA GGCCTGGGCC GGGTACGTCC ATGTCGGCTG CTGA
 
Protein sequence
MRGDETAAGA AAADEVEELV GRFARSGDRG AIDRAVAVAA AAVDGLADGD VDRAAALANL 
AVTLMRRYEA LGDGADLERA HESITVACAE APPGSPHAEG VLTIAGSVAM TRHTRSGDVQ
ELREAVRITR ALCDGAAESA RRRMYLSNLT FMLVRLAEAT DDRALLLEAE AAGREAVVLS
DPDDPSNALV YNNLAIALHR RYTVSNDVAF LAEAVEWQVK TLAGVEPAHQ EYRKWQSNHG
ATLRELHGRT GEAELLRRAV EACRAATQGA DPRHPMFAHW QANLSAALLL AYRESGDSSL
LRQAVTAGRA AYEAAGPGSP DLPLLLTDLG ALLDQASLRT SDAEELAQSV EMLRRAAVTV
PRKHVAYSIV HTNLAIALLR TAEADPAGGF VPLLAAIGHA RKALKRIGRD DPHRAELLGA
MSAAHLRLHG FRGFGSALIR AVRDAEAALA ATPSRHPDRA VHLGRLAVVR YTQYQRYGDR
KLLIAARDLL IEAGRQPGAR LMTRIDALRG AGEYSGEAGL GSDRLGLLAE AIDLATRVAP
RTLARVDREH RVSLLTGLAT EVAQAALDQG QPERAVELLE QSRGLLAADV LDARGTDLAA
LRAVRPDVAG EVVALRARWE RLDRAQPRLG EVTADAQTSG IPAAQPAPSQ SAPSVSVSVS
AAAPTASQAS AVDLLEDPQQ LSTERAAIGA AWDALVAEIR TLVGFADFMR PPRVQRLVEQ
LPDGPVVYVY AGSERSDALI VSGSGVECVR LPNLRAAEAT TRAEQLHAAL ADAESDYADV
AEAARESMRE LLVWLWDTIA QPVVAALGYD AAHADPANHA DPANPADLPR MWWCPVGVLS
ELPLHAAESG PHTLLDRAVH SYTATLRALG DAHSRPVPPS RAALVVGAHD LTGSGRLPAA
EHEVHTVGRL LPHATVLDAP TAESVRTALL SHPVAHFACH GVADRSDPAA GLLLLADHAT
DPLTVAEVSA LRLDGRLAVL TACQTTVSAP TLADESVHLS AAFQLAGYRA VVGTLWSVSD
EASARLAKDF YNTLTAEGTA ELDTDRAARA VHAAVRRLRR HYRNAPKAWA GYVHVGC