| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6523 |
|---|
| Symbol | |
|---|
| ID | 8337887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 7518893 |
|---|
| End bp | 7519549 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644959619 |
|---|
| Product | Hemerythrin HHE cation binding domain protein |
|---|
| Protein accession | YP_003117212 |
|---|
| Protein GI | 256395648 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0957507 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.103756 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCT CCGGTGCTAC GTCGCGCGTC GACACCCACG ACATGGTTCT GATCCACCGA
GTCCTCCGTC GCGAGTTCGG TCAGTTGCCC CGACTGTTCC GCTCCGCGGC CAATGACCGG
GCACGTTCCC AAGTCATCGG CGCGCATGCC CGCGAGATGT TGGACTTCCT CCACACGCAC
CACACCGGCG AGGACGAACT GCTCTTTCCG CTGCTGCGAG AGCGAGCCGC GCTCGACCCG
GAGCTGATGG ACCGGATGGA TGCACAGCAC ATGCAGGTCG ACGATGCCGT CAAGGCTCTC
GAAGCGGAAC TGCCGGCATG GACCACGAGC GCCGACGCCG ACGCCGGCGA GCAGATGGCG
ACCCGCGTCG AAGCCACGAT GCCGACGCTG ATCGCCCACC TGGCTGAGGA GGAGGAGAAA
CTGCTCCCGA TCGTCTCGGA CACGGTGACG CAAAGCGAAT GGGACACGCT CGCCAAGCAC
GGCATGAGCG CGATTCCCCT CACGCGGCGG CTGGTCATCC TCGGCCACAT CACCGAGGAG
GCCACTGAGG CGGAGCGACA GAGATTCATG CAGGTCATTC CAGCTCCGGC CCGCCTGGCC
TACAAGCTGA TCGGCCACCG CCAGTTCACC CGCGAAACCG CAGCGATCCG CGGCTGA
|
|---|
| Protein sequence | MSASGATSRV DTHDMVLIHR VLRREFGQLP RLFRSAANDR ARSQVIGAHA REMLDFLHTH
HTGEDELLFP LLRERAALDP ELMDRMDAQH MQVDDAVKAL EAELPAWTTS ADADAGEQMA
TRVEATMPTL IAHLAEEEEK LLPIVSDTVT QSEWDTLAKH GMSAIPLTRR LVILGHITEE
ATEAERQRFM QVIPAPARLA YKLIGHRQFT RETAAIRG
|
|---|
| |