Gene Caci_6513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6513 
Symbol 
ID8337877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7505204 
End bp7506460 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content69% 
IMG OID644959610 
ProductRadical SAM domain protein 
Protein accessionYP_003117203 
Protein GI256395639 
COG category[R] General function prediction only 
COG ID[COG0641] Arylsulfatase regulator (Fe-S oxidoreductase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.214971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCACC TACCGCTGCT GAACGCGGAC GTCCCGGCGA CAGCCGAGTG GCCCGACCGG 
TCCGTGGTCG AGGCCGCGCT GGCCGACCCG GCATGGCATC CGCTGCCGTT CACCCACTAC
ATCATCAAGC TGCACGGCCG GTGCAACCTC GCGTGCGACT ACTGCTACAT GTACGAGATG
GCCGACCAGA GCTGGCGGGG AAAGCCGGTG GCCATGACCC GGGCGACCGT CGAGGCCACA
GCCGCGCGGA TCACCGAGCA TCTCGAAGCA CACCGGGACG AGGTGAGCGA GGCCGTCATC
TCCCTGCACG GCGGCGAGGC GCTGCTGGCC GGAGCCGAAG GCCTCGACTA CGCAGCCGGA
GTGTTCCGGG CAGCCGTACC AGATGGCGTC TCCGCCCAGC TGACTTTGAC AACGAACGGG
GTGTTGCTCA CCGATGAGCG GATCCTGCGA GTGCTGGAGC AGCACGACAT CGCCGTGACG
CTCAGCCTCG ACGGCGCCCG GGAAGCCCAA GACCGGCACC GCAAGTACGC CAACGGCCGC
GGCAGCTACG ACGCCGTCAT GGCCGGTGCG GCCGCACTGC GCGCGCACAC GGCGCCCGAA
CGGCTGCGGA ACGTGCTGTG CGTGATCGAC GTGGCCAACG ACCCGTTGGA GACCTACGCC
GAACTCGCCG CGCTGGGCGC TCCGCAGATG GACTTCCTGC TGCCGCTGGG GAACTGGGAG
CAGCGACCGC CCGGGCGGGA ATCGGACGAC GACTCGACGC CATACGCCGA CTGGCTCATC
CCGATCTTCG ACCTCTGGTA CTCCACGATC CCCATGACCA CCTCGGTCCG GCTGTTCGAC
GGCATCATCC GCCTCGCGCT CGGCGGACAC GGCAGCTCCG AGACCATCGG CCTGGGAAGC
TTCCAGTCGC TGGACATCGA CACCGACGGC TCGATCGAGC TGGTCGACGC GCTGAAGTCG
ACGTTCCAAG ACGCTCCGGC GACCGGACTC GACGTGTTCG GCAACGCCTT CGACGACGCG
CGCCTGCACC CCGGAGTCGT GGCTCGACAG CGCGGCGTGG AGACCCTGTC GCCGACCTGC
CAAGCCTGCG CGCTCCGAGA GGTGTGCGGC GGCGGCGAGT ACAGCACGCG CTACCGGCGC
GGGACAGGGT TCCTGAACCC GTCGGTGTAC TGCGCAGATC TCAGCAAGCT GATCAGCCAC
GTCCGCGACC GGGTCGTGGC CGACGTCGCC GCGCTGGCGG CGGCCGCCGG TGCTTAA
 
Protein sequence
MIHLPLLNAD VPATAEWPDR SVVEAALADP AWHPLPFTHY IIKLHGRCNL ACDYCYMYEM 
ADQSWRGKPV AMTRATVEAT AARITEHLEA HRDEVSEAVI SLHGGEALLA GAEGLDYAAG
VFRAAVPDGV SAQLTLTTNG VLLTDERILR VLEQHDIAVT LSLDGAREAQ DRHRKYANGR
GSYDAVMAGA AALRAHTAPE RLRNVLCVID VANDPLETYA ELAALGAPQM DFLLPLGNWE
QRPPGRESDD DSTPYADWLI PIFDLWYSTI PMTTSVRLFD GIIRLALGGH GSSETIGLGS
FQSLDIDTDG SIELVDALKS TFQDAPATGL DVFGNAFDDA RLHPGVVARQ RGVETLSPTC
QACALREVCG GGEYSTRYRR GTGFLNPSVY CADLSKLISH VRDRVVADVA ALAAAAGA