Gene Caci_6476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6476 
Symbol 
ID8337840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7466789 
End bp7467289 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content69% 
IMG OID644959574 
ProductRicin B lectin 
Protein accessionYP_003117167 
Protein GI256395603 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGC ACCGTCACGC CGCGCTGGCC CTCGTCGCCG CGATCGCCGC CAGCGGTCTG 
GCGGCCTCGG CCCCGGCCCA CGCCGAGGAC CCGATCGTCA AACTCGTGAG CTCCCAGAAC
GGCAAGTGCC TGCAGCCGGT CAACGGCTCG CTGCTCCAGG GGGACGCGGT CGTGCAGATG
ACCTGCAACG GCAGCCGCGC CCAGCAGTGG ACGGTCACGG GGATCTCCTC GACGGCCGTC
CACCTGGTCA ACCGGAACAG CCAGCTGTGC CTCGACGCCC GCGGCGGGGC CGTCAACGGC
ACGCCGATCC AGCAGTGGAC GTGCAACTCG ATCTCCAACG AGAAGTGGGG CTTCGGCATC
ACGAACAACC TTTTGGTGTC GTTCGTCGCC GGCACCGCCA GCCATTGCAT CGCCACGCCG
GGATTCCCGG ACGGCCTGCC GATGGAGCTG CGGTTCTGCG ACAGTAACTC GTCGCAGCTC
TGGAGCCGTC CCGCCGGCTG A
 
Protein sequence
MIKHRHAALA LVAAIAASGL AASAPAHAED PIVKLVSSQN GKCLQPVNGS LLQGDAVVQM 
TCNGSRAQQW TVTGISSTAV HLVNRNSQLC LDARGGAVNG TPIQQWTCNS ISNEKWGFGI
TNNLLVSFVA GTASHCIATP GFPDGLPMEL RFCDSNSSQL WSRPAG