Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6469 |
Symbol | |
ID | 8337833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 7462120 |
End bp | 7462983 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644959568 |
Product | haloalkane dehalogenase |
Protein accession | YP_003117161 |
Protein GI | 256395597 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.805806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTGC TTCCCGTCCT GGACTCCGCC ATCCACTACC GCGAGTCCGG CGATCCCAAC GGCCTGCCGT TCGTGTTCCT GCACGGCAAC CCCACTTCCT CCCACCTATG GCGAGACGTC CTGCCTCGAG TGGCCGCACC CGGCCGTCGC CTGCTGGCTC CCGACCTGAT CGGTATGGGC GCCTCCGGCA AGCCCGACCT CGCCTACTCC TTCGACGACC ACGCTCGCTA CCTCGACGCC TGGTTCGACG CGCTCGGCGT GGACGAGGCG GTCCTCGTCG GCCACGACTG GGGCGGCGCG CTCGCCTTCG ACCGTGCGGC CCGCCTGCCC GAGCGCGTCC GTGGCCTCGC CTTCGCCGAG ACCATTGTCA AACCGCTCGT CGGCGACGAG TTCCCGGTGG CGGGCCGGGA GTTGTTCGAG CAGTTGCGTA TGCCGGGCGT GGGAGAGGAG ATGGTCCTGG AGAAGTCGTT GTTCATCGAA GGAGTCCAGG GCACCCTCGC CACTCCGCTA GACCCCGCCG ACCTCGACGT CTACCGCCGG CCCTTCCCCA CGCCGGAAAG CCGCCGCCCG ATCTTGGCCT GGACGCGCAT GATGCCGTTG GACGGCGAGC CCGCGGACGT CGTCGCGCGT GTCGAGCGCT ACGACCGTTG GCTGGCCACG AGTCCAGAGG TACCGAAACT GCTCGTCGCG TTCGAACCCG GTCCCGGCGC GATGACCGAT GCCGGAGCGG TGGCCTGGTG CGAGGCCAAC ATCGCAGGGC TGGAGGTCTC CCGGCACGGG GTCGCCGGCC ACCACTGCCC GGAGGACCGC CCTGAGGAGA TGGCGGCGGC GATCAACGCT TGGGCGCGAA GGAACTCTCT ATAG
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Protein sequence | MPLLPVLDSA IHYRESGDPN GLPFVFLHGN PTSSHLWRDV LPRVAAPGRR LLAPDLIGMG ASGKPDLAYS FDDHARYLDA WFDALGVDEA VLVGHDWGGA LAFDRAARLP ERVRGLAFAE TIVKPLVGDE FPVAGRELFE QLRMPGVGEE MVLEKSLFIE GVQGTLATPL DPADLDVYRR PFPTPESRRP ILAWTRMMPL DGEPADVVAR VERYDRWLAT SPEVPKLLVA FEPGPGAMTD AGAVAWCEAN IAGLEVSRHG VAGHHCPEDR PEEMAAAINA WARRNSL
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