Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6466 |
Symbol | |
ID | 8337830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7458854 |
End bp | 7459654 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644959565 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_003117158 |
Protein GI | 256395594 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.185933 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.684135 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGGAC AAGAGTCGGC AACGGTTGGA GCGAGCCAGT ACCGGGAGCG CAACTCCACC GCCGATCGGG CGCTGGACAT CCTGGGGCTG TTCTCGGAAA GCAGGCTGTC GGTGTCGGGC CAAGAAGTGG CCACAGCATT GGGTGCCGCC CGTTCGACGG CATACCGGTA CCTGCAGAGC CTGGTTGCGA GCGGCTTTCT CGAAGAGGAC CCCGCCGGTG GATTCCGGCT CGGTGTCCGC ATCTTGGAGC TGGCACGCCT GGCACGACGC GGCTACGGCC TATCGGAGAT CGCGCTTCCG GTCATGAACG ACCTGTGCGC CGAGGTCGGC GAGACCGTAC TGCTGACCCG CCGCTCCGGC AGCGCGGCGG TCTGCATCGA ACGCTGCGAG GCACAGCAGC CAGTGCGGAT CTCCTATGAG CGCGGCAGCG TGCTTCCGGC CAACGCGGGA GCTTCCGCCC TGGCACTTCT CGCCTGGTTG CCCGAGCAGC AGTGCCGCCA GGAACTGGCC GGCCAGCGGC TCCAGCGGTT CACCGCCCGC ACGATCACTG ACGTCGAGAC GCTCATGGAA CGGCTCGCGA AAATCCGCCG CGACGGCTAC AGCGTCAGCC GGGGAGAACT GGACACCGAC ATTCTCGGTA TCGCCGCGCC CGTCCGAGGA GCCTCCGGCG AGGTGGTCGC CGCCGTGAGC ATCGCCGCGC TGGAGCATCG GGTCCCCGAC CGCAGACTCG ACGACGTCGT GACAGCGCTC CGGGAGGCCG CCGAGCTCAT GAGCAGCCGC TTGGCGGTCA TCGGAGACTG A
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Protein sequence | MTGQESATVG ASQYRERNST ADRALDILGL FSESRLSVSG QEVATALGAA RSTAYRYLQS LVASGFLEED PAGGFRLGVR ILELARLARR GYGLSEIALP VMNDLCAEVG ETVLLTRRSG SAAVCIERCE AQQPVRISYE RGSVLPANAG ASALALLAWL PEQQCRQELA GQRLQRFTAR TITDVETLME RLAKIRRDGY SVSRGELDTD ILGIAAPVRG ASGEVVAAVS IAALEHRVPD RRLDDVVTAL REAAELMSSR LAVIGD
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