Gene Caci_6466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6466 
Symbol 
ID8337830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7458854 
End bp7459654 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content68% 
IMG OID644959565 
Producttranscriptional regulator, IclR family 
Protein accessionYP_003117158 
Protein GI256395594 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.185933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.684135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGAC AAGAGTCGGC AACGGTTGGA GCGAGCCAGT ACCGGGAGCG CAACTCCACC 
GCCGATCGGG CGCTGGACAT CCTGGGGCTG TTCTCGGAAA GCAGGCTGTC GGTGTCGGGC
CAAGAAGTGG CCACAGCATT GGGTGCCGCC CGTTCGACGG CATACCGGTA CCTGCAGAGC
CTGGTTGCGA GCGGCTTTCT CGAAGAGGAC CCCGCCGGTG GATTCCGGCT CGGTGTCCGC
ATCTTGGAGC TGGCACGCCT GGCACGACGC GGCTACGGCC TATCGGAGAT CGCGCTTCCG
GTCATGAACG ACCTGTGCGC CGAGGTCGGC GAGACCGTAC TGCTGACCCG CCGCTCCGGC
AGCGCGGCGG TCTGCATCGA ACGCTGCGAG GCACAGCAGC CAGTGCGGAT CTCCTATGAG
CGCGGCAGCG TGCTTCCGGC CAACGCGGGA GCTTCCGCCC TGGCACTTCT CGCCTGGTTG
CCCGAGCAGC AGTGCCGCCA GGAACTGGCC GGCCAGCGGC TCCAGCGGTT CACCGCCCGC
ACGATCACTG ACGTCGAGAC GCTCATGGAA CGGCTCGCGA AAATCCGCCG CGACGGCTAC
AGCGTCAGCC GGGGAGAACT GGACACCGAC ATTCTCGGTA TCGCCGCGCC CGTCCGAGGA
GCCTCCGGCG AGGTGGTCGC CGCCGTGAGC ATCGCCGCGC TGGAGCATCG GGTCCCCGAC
CGCAGACTCG ACGACGTCGT GACAGCGCTC CGGGAGGCCG CCGAGCTCAT GAGCAGCCGC
TTGGCGGTCA TCGGAGACTG A
 
Protein sequence
MTGQESATVG ASQYRERNST ADRALDILGL FSESRLSVSG QEVATALGAA RSTAYRYLQS 
LVASGFLEED PAGGFRLGVR ILELARLARR GYGLSEIALP VMNDLCAEVG ETVLLTRRSG
SAAVCIERCE AQQPVRISYE RGSVLPANAG ASALALLAWL PEQQCRQELA GQRLQRFTAR
TITDVETLME RLAKIRRDGY SVSRGELDTD ILGIAAPVRG ASGEVVAAVS IAALEHRVPD
RRLDDVVTAL REAAELMSSR LAVIGD