Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6444 |
Symbol | |
ID | 8337808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7435398 |
End bp | 7436210 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644959544 |
Product | urease accessory protein |
Protein accession | YP_003117137 |
Protein GI | 256395573 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0829] Urease accessory protein UreH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.31216 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.108371 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCGA CGGCGCGCCT GGTCGCCGAG GCACGTTCTG ACGGCACGAC CCGTCTGGCC ACCCTCGCCG GGCAAGCCCC CTTATTGCTG CGCCAGACCA TGGGGGACGG CACGACGGAC GCCGCCCAGG TCCACCTCGT CGCTGGCGCC GCCGGACCCA TCGGCGGCGA CGAACTGCAC CTCGGTGTCC ACCTCGGCCC GGGAGCCCGC GTGCGGATCC GCAGCGTCGC CGCCTCCCTC GCCCTGCCCG CAACCCAGCC GTGTGAGTCG ACCCTCGATA TCAGGATACG TATCGAGAGC GGCGCCGCGC TCGACTGGAG CGCCCAGCCG CTCATCGCCG CGCGCGGCGC CCGCCACCGC ACGACCGTGA GCATCGAGAT GACCGACGAC GCCCACCTGA TCTGGCAGGA ACAGACGCTG CTCGGCCGGC ACGGTGAGGA GCCCGGATCG GTGGTCACTC GTCTGCGTGT CCGCCGCGGC GGCCGCCCTC TGCTCGACCA CACGCTCGCT GTCGGCCCGG CCCATCCCGG TTCGCTCGGA CCCGCCGTCG TCGGAGCCGA TCGTGCCGGC TCCACGACCG TGATCGTTGA TCCGGCCTGG ACCAGAGTGC CACCCGCCAA GCGGCTCACC ATCGAACCCC GCGACGACGA CCACGGCGCT CTCGCGGTGT TCCCGCTCGG TGGACCCGCA GCCGTCATCA GTGCCTTGGC ACCGGACGCC CTCAGTCTGC AACGGCTCCT CAGCCGGAAC GCAGCCCTTC GCCTTCCTGC GCTTGCGGCG TATCCCGCGC AGGCCGTCGC AGGATCAGGT TGA
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Protein sequence | MKATARLVAE ARSDGTTRLA TLAGQAPLLL RQTMGDGTTD AAQVHLVAGA AGPIGGDELH LGVHLGPGAR VRIRSVAASL ALPATQPCES TLDIRIRIES GAALDWSAQP LIAARGARHR TTVSIEMTDD AHLIWQEQTL LGRHGEEPGS VVTRLRVRRG GRPLLDHTLA VGPAHPGSLG PAVVGADRAG STTVIVDPAW TRVPPAKRLT IEPRDDDHGA LAVFPLGGPA AVISALAPDA LSLQRLLSRN AALRLPALAA YPAQAVAGSG
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