Gene Caci_6444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6444 
Symbol 
ID8337808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7435398 
End bp7436210 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content72% 
IMG OID644959544 
Producturease accessory protein 
Protein accessionYP_003117137 
Protein GI256395573 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0829] Urease accessory protein UreH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.31216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.108371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCGA CGGCGCGCCT GGTCGCCGAG GCACGTTCTG ACGGCACGAC CCGTCTGGCC 
ACCCTCGCCG GGCAAGCCCC CTTATTGCTG CGCCAGACCA TGGGGGACGG CACGACGGAC
GCCGCCCAGG TCCACCTCGT CGCTGGCGCC GCCGGACCCA TCGGCGGCGA CGAACTGCAC
CTCGGTGTCC ACCTCGGCCC GGGAGCCCGC GTGCGGATCC GCAGCGTCGC CGCCTCCCTC
GCCCTGCCCG CAACCCAGCC GTGTGAGTCG ACCCTCGATA TCAGGATACG TATCGAGAGC
GGCGCCGCGC TCGACTGGAG CGCCCAGCCG CTCATCGCCG CGCGCGGCGC CCGCCACCGC
ACGACCGTGA GCATCGAGAT GACCGACGAC GCCCACCTGA TCTGGCAGGA ACAGACGCTG
CTCGGCCGGC ACGGTGAGGA GCCCGGATCG GTGGTCACTC GTCTGCGTGT CCGCCGCGGC
GGCCGCCCTC TGCTCGACCA CACGCTCGCT GTCGGCCCGG CCCATCCCGG TTCGCTCGGA
CCCGCCGTCG TCGGAGCCGA TCGTGCCGGC TCCACGACCG TGATCGTTGA TCCGGCCTGG
ACCAGAGTGC CACCCGCCAA GCGGCTCACC ATCGAACCCC GCGACGACGA CCACGGCGCT
CTCGCGGTGT TCCCGCTCGG TGGACCCGCA GCCGTCATCA GTGCCTTGGC ACCGGACGCC
CTCAGTCTGC AACGGCTCCT CAGCCGGAAC GCAGCCCTTC GCCTTCCTGC GCTTGCGGCG
TATCCCGCGC AGGCCGTCGC AGGATCAGGT TGA
 
Protein sequence
MKATARLVAE ARSDGTTRLA TLAGQAPLLL RQTMGDGTTD AAQVHLVAGA AGPIGGDELH 
LGVHLGPGAR VRIRSVAASL ALPATQPCES TLDIRIRIES GAALDWSAQP LIAARGARHR
TTVSIEMTDD AHLIWQEQTL LGRHGEEPGS VVTRLRVRRG GRPLLDHTLA VGPAHPGSLG
PAVVGADRAG STTVIVDPAW TRVPPAKRLT IEPRDDDHGA LAVFPLGGPA AVISALAPDA
LSLQRLLSRN AALRLPALAA YPAQAVAGSG