Gene Caci_6435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6435 
Symbol 
ID8337799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7427040 
End bp7427576 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content71% 
IMG OID644959535 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003117128 
Protein GI256395564 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.414411 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCGC GAACCGCCGA CCACGACAAC GCCGAGCCCT CGACCGCGGC CCATCCCGCC 
CGCGCCGTCG CCGGCACTGT CGACCGGGTC ACCGATGCCC TGCTGACCGC CTCCCGGCTG
CTGGTCGCCG TCTCAGCACG CTCGCTGAAC GAGGTCGAGG ACAGCCTGAC CCTGCCGCAG
TTCCGCGCAT TGGTCGTCCT GTCCTCTCGC GGACCGCTGC GGCTGACGCA CCTGGCCGAG
CACTTGGCGG TCAACCCCTC GACGGCGATG CGCATGGCCG AGCGTCTGGC CGCCGCCGGA
ATGATCGACC GCTCGCCGAA TCCCGAAAAC CGCCGCGAGT CCATCGCCAC CCTGACCGCC
GCCGGCCGCG AAGTGGTCGA ACAGGTCACC AGCCGACGCC GCGAGGAGAT CACCACCATC
GTCGAGCGAA TGCCCCCCGA CCACCTCGAC CGGCTGGTAG AGGCCCTGGA ATCCTTCAGC
GCCGCCGGCG GCGAACCCTC AGCCGGATAC GACCCGATCC CCCTGGGCTG GCAGTAA
 
Protein sequence
MSPRTADHDN AEPSTAAHPA RAVAGTVDRV TDALLTASRL LVAVSARSLN EVEDSLTLPQ 
FRALVVLSSR GPLRLTHLAE HLAVNPSTAM RMAERLAAAG MIDRSPNPEN RRESIATLTA
AGREVVEQVT SRRREEITTI VERMPPDHLD RLVEALESFS AAGGEPSAGY DPIPLGWQ