Gene Caci_6428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6428 
Symbol 
ID8337792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7417974 
End bp7418564 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content75% 
IMG OID644959528 
ProductGrpE protein 
Protein accessionYP_003117121 
Protein GI256395557 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.566731 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACG AAAACGGCGC CCTGGGGCGC GATGCCCCGC CGACCGGGGC TGAGACGCGG 
GCCGAAGCCC CCGCCGACAG TGCGAGCACC CCTGAAAATC TCACCGAACG GGCCCCAAGG
GAATCCACCG AGAGGCCTTC CGGTCCTGAC GCGCCCGCGA CCGCAGAGCT CGAAGACCGT
TGGCGGCGCG CGCTCGCCGA TCTCGACAAC GCCCGCAAGC GGCACGCCCG GGAACTGAGC
CAGGCGGCCG CGGCCGAGCG CCGCCGTGTC TGCCTGGCCT GGCTCCCGGT GGTCGACCAC
CTCGAACTCG CGCTCGACCA CGCCGACGGC GACTCGCCGT TCGTCGCCGG TGTGCGGGCG
GTCCGTGACC AGGCGGTCGG CGTGCTCGCC TCGCTCGGCT TCGCCCGCGA CGACCAGACC
GGCGTGCCGT TCGACCCCCA GCGGCACGAG GCGACCGGCG TGGTCGAGGA CCCCGGCAGC
CCGCCGGGGA CGGTCGTCAG GGTCCTGCGC CCGGGTTACG GCCGGCCGCC GGAGTCGCAA
CTGCGCCCGG CCGCCGTACT GGTCAGCGCC AAGAGCGCCG GGCAGGGGTG A
 
Protein sequence
MADENGALGR DAPPTGAETR AEAPADSAST PENLTERAPR ESTERPSGPD APATAELEDR 
WRRALADLDN ARKRHARELS QAAAAERRRV CLAWLPVVDH LELALDHADG DSPFVAGVRA
VRDQAVGVLA SLGFARDDQT GVPFDPQRHE ATGVVEDPGS PPGTVVRVLR PGYGRPPESQ
LRPAAVLVSA KSAGQG